Gene Lferr_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0180 
Symbol 
ID6876130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp169230 
End bp169700 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID642788057 
ProductISPsy14, transposase 
Protein accessionYP_002218646 
Protein GI198282325 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA TTCGAGAAGT ATTGCGATTG AAGTACGAGG CGGGACTATC CGCCAGGGCG 
ATCGCCCGCA GCGTCAACGC CGGCAGGACA ACGGTGCAGG AATACCTTCA GCGTTTTGCG
GCGAGCGGTC TTTCCTGGCC CACGGAGCTG GATGATGCGG CTTTGGAGAG CCGATTGTTT
CCTCCGCCAC CACCGACTGG CACGGCGCGA CCAGAACCGG ACTGGACGGT TGTCCAACAC
GAGCTGCGGC GCAAGGGGGT CACCCTGTTG CTCCTCTGGC AGGAATACAA GGAGCGGGAA
CCCGACGGGT TCCAGTATTC GTGGTTCTGT GACTGCTACC GCGCCTGGCT GGGTCGCCAG
GACCTGGTCA TGTGGCAACA CCACCGGTCG GGAGAGCAAT GCTTCATCGA CTATGCGGGA
ATGACGGCGC CGGTTGTCAA CGGCGCTTTA AAACTGACAC ACTGCCGTTG A
 
Protein sequence
MRKIREVLRL KYEAGLSARA IARSVNAGRT TVQEYLQRFA ASGLSWPTEL DDAALESRLF 
PPPPPTGTAR PEPDWTVVQH ELRRKGVTLL LLWQEYKERE PDGFQYSWFC DCYRAWLGRQ
DLVMWQHHRS GEQCFIDYAG MTAPVVNGAL KLTHCR