Gene Lferr_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0174 
Symbol 
ID6876124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp165878 
End bp166240 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content57% 
IMG OID642788051 
Producthypothetical protein 
Protein accessionYP_002218640 
Protein GI198282319 
COG category[S] Function unknown 
COG ID[COG5569] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.984641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT TTTATCTCAC CCTCATCCTG GCGTGTTCGG CGGCGGTCAC GCTTCCGGCA 
TATGCGGCCA CGGGCAACAT GCCGGGCATG GACAATATGG GCACCGTATC AGGCCAAGCG
ACCAAGGCCC AGACCTTCAT GGGGCAGGGC AAAATCAACA GCATCAATCC CGCTGCGAAC
ATGGTCAATG TCGCCATGGG CCCCGTCAAG GCCCTTGGCT GGCCCAGTAT GTCAATGAAT
TTCCTGCTCC AGAACACGGC CATGCTCAAC AGCCTCAAGA CTGGAGAGAT GGTGAATTTC
GTCTTCGCAA AGGATACCGC CGGGGGGTAC GTCATCACTA GGATCACGCC GGTCAGGCAA
TGA
 
Protein sequence
MKRFYLTLIL ACSAAVTLPA YAATGNMPGM DNMGTVSGQA TKAQTFMGQG KINSINPAAN 
MVNVAMGPVK ALGWPSMSMN FLLQNTAMLN SLKTGEMVNF VFAKDTAGGY VITRITPVRQ