| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0167 |
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| Symbol | |
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| ID | 6876117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 155529 |
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| End bp | 157553 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642788045 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_002218634 |
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| Protein GI | 198282313 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.175909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCATT CGGGACATCA GAAACAAGGG ATGGGTACCG CTCATTCCAG TGCGCACGGC
GGTCACAACC ATGCCGCCAT GATCGCCGAT TTCCGGCGGC GGTTTTGGGT GTCACTGGCA
CTGACGATCC CTATCCTTTT TTTGTCGCCG CTTATCCAGC ATCTGCTGGG ACTGGAGGCT
ACTCTTGCCT TTACGGGGTC GTCCTATGTG CTTTTCGCAC TATCGAGCGG GGTTTATTTC
TACGGCGGCT GGTCCTTCCT GAAAGGACTA TTTTCCGAGC TCAAAACCCG CAAGCCAGCC
ATGATGACGC TGATCGCCCT GGCCATCAGC GTGGCCTATT TTTACTCGAG TGCCGTCGTG
TTCGGGGTTC AAGGCGAAGT GTTCTTCTGG GAACTCGCTA CGCTGATCGA TGTGATGTTG
CTCGGCCACT GGATCGAGAT GAAATCGGTC ATGGGGGCTT CCGGCGCACT GGAAAAACTG
GTGCAAATGA TGCCTTCCGA GGCCCATCTC GTGGCCCCGG ACGGTATGAA AGACGTGCCG
GTCGCCAATC TGCAGCGCGG TGACCGGGTG CTGGTGAAGC CCGGCGAAAA AATCCCTACA
GATGGTCTGA TCGTCGATGG GCGAACCACC GTCAACCAGG CTATGCTCAC TGGCGAAAGT
CGGCCCGTAG AGAAGGGCAG CGGTGACGAA GTTATCGGTG GTTCGGTCAA CGGGGAGTCA
AGTATCACCG TCAAGGTCCA CAAGACCGGC AGTGAAACCT ATCTTTCACA GGTCATCGAG
ATGGTGCGCC GGGCACAGGA GTCCCGCTCC CGGACCCAGG ACTTGGCCGA CCGTGCGGCC
CTGATGCTGA CCCTTACCGC GTTGAGTGTC GGGGGGCTTA CCCTTGCCAC TTGGCTGGTC
ATTGGCCAGC ACTTCGAGTT TGCCCTGGCC CGCATGGTCA CAGTTATGGT GATTGCCTGT
CCCCATGCTC TGGGCCTAGC GATTCCGCTG GTCGTCGCCG TGTCCACCGC CATGGCGGCG
CAGCATGGGC TGCTTATCCG GGACCGGTCT GCTTTTGAGC GGGCGCGCCA ACTGCAGGCG
GTGGTGTTCG ACAAGACCGG GACCTTGACG GAGGGGCGGT TCGGCGTCAC GGATGTGGTC
GTGCTGGGCG GATATGCCGA AGATGAGGTC GTGCGGTTCG CCGCAGCCCT CGAAAGCCAG
TCGGAGCACC CCATCGCCGC CGGCATCGTG GCAGATGCCA AAGAGAGGGG CATAAGCTTC
GAGCCTCCCA AGGAATTCAA GGCCATCCCC GGCAAGGGCG CACAAGCCAT CGTGGAAGGA
CGCAACGTGA AGGTCGTGAG CCCCGGCTAT CTCAAGGAGT ATGGCCTCGA TGCCAGCGAT
GAGCGGATCG GAGCCTTGGC ATCCCAGGGC AAAACGGTGG TATACCTGCT CGTCGACGAG
AAAGCGGCAG GGGCGGTCGC GCTGGCCGAT ATCATTCGAG CAGAGTCGCG GGAAGCCCTC
GCACGGCTGA AGGGGATGGG CGTACAGGTG ATGATACTGA CCGGGGACTC GGAAGCGGTG
GCCCGCTGGG TGGCCCAGGA AATGGGGCTT GACGATTATT TCGCCGAAGT GCTGCCGGAT
CAAAAGGCGG AGAAGATCAA GGCAGTGCAG GCGCGGGGGT TGCGCGTGGC CATGGTTGGC
GACGGTGTCA ACGATGCGCC CGCCCTAGTG GAGGCGGACG TCGGGATCGC CATCGGGGCA
GGCACGGACG TCGCCATCGA GTCGGCGGAC ATCGTGCTGG TCCGCTCCGA TCCCCGGGAC
GTGGTGGCCA TCCTGGAACT TTCCCGCGCC ACCTATCGCA AGATGGTCCA GAACCTGTGG
TGGGGCGCCG GCTACAACAT CGTGGCGATC CCCCTTGCTG CCGGAGTGGC TTATAGCATT
GGCCTGGTGC TTTCCCCGGC GGTGGGGGCG GCCCTGATGT CCGTTTCCAC CGTGATCGTC
GCCGTCAACG CCAAGCTCCT TCAGAGGGTT CGGCTCACCG CCTAG
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| Protein sequence | MDHSGHQKQG MGTAHSSAHG GHNHAAMIAD FRRRFWVSLA LTIPILFLSP LIQHLLGLEA
TLAFTGSSYV LFALSSGVYF YGGWSFLKGL FSELKTRKPA MMTLIALAIS VAYFYSSAVV
FGVQGEVFFW ELATLIDVML LGHWIEMKSV MGASGALEKL VQMMPSEAHL VAPDGMKDVP
VANLQRGDRV LVKPGEKIPT DGLIVDGRTT VNQAMLTGES RPVEKGSGDE VIGGSVNGES
SITVKVHKTG SETYLSQVIE MVRRAQESRS RTQDLADRAA LMLTLTALSV GGLTLATWLV
IGQHFEFALA RMVTVMVIAC PHALGLAIPL VVAVSTAMAA QHGLLIRDRS AFERARQLQA
VVFDKTGTLT EGRFGVTDVV VLGGYAEDEV VRFAAALESQ SEHPIAAGIV ADAKERGISF
EPPKEFKAIP GKGAQAIVEG RNVKVVSPGY LKEYGLDASD ERIGALASQG KTVVYLLVDE
KAAGAVALAD IIRAESREAL ARLKGMGVQV MILTGDSEAV ARWVAQEMGL DDYFAEVLPD
QKAEKIKAVQ ARGLRVAMVG DGVNDAPALV EADVGIAIGA GTDVAIESAD IVLVRSDPRD
VVAILELSRA TYRKMVQNLW WGAGYNIVAI PLAAGVAYSI GLVLSPAVGA ALMSVSTVIV
AVNAKLLQRV RLTA
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