Gene Lferr_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0162 
Symbol 
ID6876112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp151506 
End bp152192 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content59% 
IMG OID642788041 
ProductHeavy metal transport/detoxification protein 
Protein accessionYP_002218630 
Protein GI198282309 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.988191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAGA AAATCTTTTT ACGCATCACC GGGATGACCT GTGAGCATTG CGCCCACAGT 
GTAGAAAAGG CGCTGCTCGG TATCCATGGT GTCGACAGCG CCCAGGTTTC TTTGGCCACG
AATCAGGCAG AAGTTTTCCT GCAGTCTTCC ATACCGACAG AAGCACTGCT GGCGGCCGTA
ACGCAGGCGG GCTATGGTGC CAAAGTAGAG CGGGATTATT TGCAAGTTCA GGCTCGATCT
ACGCAGGAAC CAGGACAGCC ACACATAGCC ATCATTGGCA GCGGCGGAGC GGCGATGGCT
GCGGCGCTTA AAGCTGTTGA ACGCGGCGCG CGGGTGACCT TGATCGAACG GGGTACCATC
GGTGGCACCT GCGTCAACGT CGGTTGCGTA CCCTCCAAAA TACTGATCCG GGCCGCGCAC
ATCGCCCATC TGCGGCGCGC AAGTCCCTTT GATGCCGGGA TTGCCGCGCA AGAGCCGATT
ATTCGCCGCG ACAGATTGCT GGCCCAGCAG CAAGGCCGCG TAGATGAGCT ACGCTATGCC
AAGTACGAAG GCATCCTGGC GCAAACTCCG GCCATCAGCC TGCTGCGCGG CGAAGCCACG
TTCCAGAACG CGCAGACGTT GTCCGTGGTG CTCGCCGACG GCGGTGTTCA CGAACTGCGG
TTTGACCGCT GCCTGATTGC TGTATGA
 
Protein sequence
MSQKIFLRIT GMTCEHCAHS VEKALLGIHG VDSAQVSLAT NQAEVFLQSS IPTEALLAAV 
TQAGYGAKVE RDYLQVQARS TQEPGQPHIA IIGSGGAAMA AALKAVERGA RVTLIERGTI
GGTCVNVGCV PSKILIRAAH IAHLRRASPF DAGIAAQEPI IRRDRLLAQQ QGRVDELRYA
KYEGILAQTP AISLLRGEAT FQNAQTLSVV LADGGVHELR FDRCLIAV