Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0162 |
Symbol | |
ID | 6876112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 151506 |
End bp | 152192 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642788041 |
Product | Heavy metal transport/detoxification protein |
Protein accession | YP_002218630 |
Protein GI | 198282309 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.988191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAGA AAATCTTTTT ACGCATCACC GGGATGACCT GTGAGCATTG CGCCCACAGT GTAGAAAAGG CGCTGCTCGG TATCCATGGT GTCGACAGCG CCCAGGTTTC TTTGGCCACG AATCAGGCAG AAGTTTTCCT GCAGTCTTCC ATACCGACAG AAGCACTGCT GGCGGCCGTA ACGCAGGCGG GCTATGGTGC CAAAGTAGAG CGGGATTATT TGCAAGTTCA GGCTCGATCT ACGCAGGAAC CAGGACAGCC ACACATAGCC ATCATTGGCA GCGGCGGAGC GGCGATGGCT GCGGCGCTTA AAGCTGTTGA ACGCGGCGCG CGGGTGACCT TGATCGAACG GGGTACCATC GGTGGCACCT GCGTCAACGT CGGTTGCGTA CCCTCCAAAA TACTGATCCG GGCCGCGCAC ATCGCCCATC TGCGGCGCGC AAGTCCCTTT GATGCCGGGA TTGCCGCGCA AGAGCCGATT ATTCGCCGCG ACAGATTGCT GGCCCAGCAG CAAGGCCGCG TAGATGAGCT ACGCTATGCC AAGTACGAAG GCATCCTGGC GCAAACTCCG GCCATCAGCC TGCTGCGCGG CGAAGCCACG TTCCAGAACG CGCAGACGTT GTCCGTGGTG CTCGCCGACG GCGGTGTTCA CGAACTGCGG TTTGACCGCT GCCTGATTGC TGTATGA
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Protein sequence | MSQKIFLRIT GMTCEHCAHS VEKALLGIHG VDSAQVSLAT NQAEVFLQSS IPTEALLAAV TQAGYGAKVE RDYLQVQARS TQEPGQPHIA IIGSGGAAMA AALKAVERGA RVTLIERGTI GGTCVNVGCV PSKILIRAAH IAHLRRASPF DAGIAAQEPI IRRDRLLAQQ QGRVDELRYA KYEGILAQTP AISLLRGEAT FQNAQTLSVV LADGGVHELR FDRCLIAV
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