Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0161 |
Symbol | |
ID | 6876111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 149933 |
End bp | 151354 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642788040 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_002218629 |
Protein GI | 198282308 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [COG2608] Copper chaperone |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCAGA AAATCTTTTT ACGCATCACC GGGATGACCT GTGCGCATTG CGCCCACAGT GTAGAAAAGG CGCTGCTCGG TATCCATGGT ATCGACAGCG CCCAGGTTTC TTTGGCCACG AATCAGGCAG AAGTTTTCCT GCAGTCTTCC ATACCGACAG AAGCATTGCT GGCGGCCGTA ACGCAGGCGG GCTATGGTGC CAAAGTAGAG CAGGATTCTT TGCAAGTTCA GGCTCGATCT ACGCAGGAAC CAGGACAGCC ACACATCGCC ATCATTGGCA GCGGCGGAGC GGCGATGGCT GCGGCGCTTA AAGCCGTTGA ACGCGGCGCG CGGGTGACCT TGATCGAACG GGGTACCATC GGTGGCACCT GCGTCAAAGT CGGTTGCGTA CCCTCCAAAA TACTGATCCG GGCCGCGCAC ATCGCCCATC TGCGGCGCGC AAGTCCCTTT GATGCCGGGA TTGCCGCGCA AGAGCCGGTT ATTCGCCGCG ACAGATTGCT GGCCCAGCAG CAAGGCCGCG TAGATGAGCT ACGCTATGCC AAGTACGAAG GCATCCTGGC GCAAACTCCG GCCATCAGCG TGCTGCGCGG CGAAGCCACG TTCCAGAACG CGCAGACGTT GTCCGTGGTG CTCGCCGACG GCGGTGTTCA CGAACTGCGG TTTGACCGCT GCCTGATTGC CACCGGGGCG AGCCCGGCAA TTCCACCGCT CCCCGGTCTT GCGGATACCC CCTACTGGAC CTCCACCGAG GCGCTGGCGA GTGAAACCAT CCCAGAACGG TTGGTCGTGA TCGGTGCGTC AGTAGTGGCG GTAGAACTCG CCCAGGCATT CGCCCGGCTC GGTAGCAAGG TGACGATCCT GGCGCGCAGC GTCCTGCTCA GTCATGAGGA TCCTGCCATT GGTGAGGCGA TTACCAGCGC GTTCCGCGCC GAAGGGATTC ATGTGCTGGA ACATACCCAG CCTAACCGGG CCGACTACAA CGATGGTCAA TTCCTGCTCA CGACGGGAAA CGGCCATCTG CGCGCCGATC GGCTATTGAT CGCCACTGGC CGTGCGCCGA ATACGCATAG CCTGAACCTT GCGGCGGTGG GCGTTGAGGT CAACGCACAC GGAGCCATCG TCATCGACAA GACGATGCGC ACCAGCGCAC CGTATATCCG CGATCTCAAG CGTCGTCTCG ATGGGGGTCA AAGGAAATTG CTCGCGAATG TCCGTAACAC AACCGGCTCG TATATCATCC AGCATGAGGA AGTAGCTCAA CTCCAACTGG GAGAGCAAGT GGTGCACACG GCCCGTTTTT CGGCCTTTTA TACGGACAGA CAAGCCCCGA GAAGGTACGT CGCGCACGGT GAGCCACGGT TTATAGCTTT TCTCACTGCC TTGGCCACGT CCTTCTTTCA GACGGCGCGC AATGGCCCCT GA
|
Protein sequence | MSQKIFLRIT GMTCAHCAHS VEKALLGIHG IDSAQVSLAT NQAEVFLQSS IPTEALLAAV TQAGYGAKVE QDSLQVQARS TQEPGQPHIA IIGSGGAAMA AALKAVERGA RVTLIERGTI GGTCVKVGCV PSKILIRAAH IAHLRRASPF DAGIAAQEPV IRRDRLLAQQ QGRVDELRYA KYEGILAQTP AISVLRGEAT FQNAQTLSVV LADGGVHELR FDRCLIATGA SPAIPPLPGL ADTPYWTSTE ALASETIPER LVVIGASVVA VELAQAFARL GSKVTILARS VLLSHEDPAI GEAITSAFRA EGIHVLEHTQ PNRADYNDGQ FLLTTGNGHL RADRLLIATG RAPNTHSLNL AAVGVEVNAH GAIVIDKTMR TSAPYIRDLK RRLDGGQRKL LANVRNTTGS YIIQHEEVAQ LQLGEQVVHT ARFSAFYTDR QAPRRYVAHG EPRFIAFLTA LATSFFQTAR NGP
|
| |