| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0143 |
|---|
| Symbol | |
|---|
| ID | 6876093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 133473 |
|---|
| End bp | 135074 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642788022 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002218611 |
|---|
| Protein GI | 198282290 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCCT TCTTCCCTGA GCCATACCCT GACGAGTTAC TCTACAGCAT ATGTGCACGC
TATCATATTA TGAGTAGGAA TAATGACTTC CGACACACGG TAGAGGACCT TTTTGGTTGT
CGCCAGGCTT GCGCTGTATA CGATTTCCCT TCTCGACTTG CTGCCTTATG TGGCCGGTTA
CCGAGGGGCA GCTCACATAC ACCGGTGAGT CTGATACGCA ATCACACACT ATTTCCACTT
TATCAGCCAT TTCTAACGGA CAATTCTGCC GGAAAGATTG CTAAAGACAT GGTCGCCAGT
GATCAAGGCG GAACCATTCA CTGCTCAATT GGAGTAATGG CCAGCTCTAT TAAATCGCCC
CGTTTTCTAC GCTATTGTCC GGTTTGCAAA GAGTCTGACA TCACTGAATT CGGAGAACCT
TACTGGCATC GTGCGCACCA GATAGCTAAC TTGCGGGCCT GTCATAGACA CGGTTCACCA
CTTAGCGACT CTGACGCTGT GATAAGTGCG CCAGTTAATA AACATGCGTT CATAGCCTTA
GATTATAATC CCGTTATCCG CACAGGAAAT CCGTCACATG GCAAACTCGA AATGCACATT
ACCGTCGCTA ATGCGGTCTC CTGGATTCTT CAAAATAATT TACCAACATT AGGATTTGGT
AGAATTGTTC ATGCATATCA TCGTTTCCTA AAATTGCGGG GTCTGATAAC TTGTGAAGGG
CATGTTCGAC AAGAAGCATT TCGTCAGACA TTTTTAAACT ACTATGGTGA AGAATTTCTC
CAGGAAGTCG GATGCCCCCT TGTCAACGGA GGCCACCAAG GATGGCTCGC GGCCATGGTG
CGGAAGCGAC GTAATTCTGC GCACCCTTTA CATCATTTGC TTCTAATTCA ATGGCTCTGC
AGCACTCCAG AGGTTTTTTA CCGTGCATGC CTTCAAATAC AGCCGGAGAT AGTCGTGCCG
AATCTGCTCA ACCTGTCGGG TATACACGCG CAGCACCACC AACCTGTATC CACGGCTGCG
GACAGAGAGG CTTCTGAAAT ATCAAAAGGA GCCGCTTTGG TTCAGAACAG TCCATTGGGA
AAACGCCGAC GTGAGTGGCT TGCCATCGTA CGACGTTCCT CAGGTATTTG CAGAAAGCAG
CTGCGAGCGG CCAACCAGGC GGCTTTTGGC TGGCTATATC GGAATGATCA CGATTGGCTG
TATGACCATC TTCCTGCACC GCTACCGCGT TCTAAGGGGC AGGACCTGCG TGTTGATTGG
GACCGGAGAG ATCAATATCT CGCCAACGAA GTGCGGCGGT CAGCGCAGGT AATTCTAAGC
GAAGCCCGGC CTAAGCAGGT GACGGTGACG GCCATAGGGA CCCACATCGG TTGTCGAACA
CTGATACGAC GTCATCTGGA TAAGATGCCT GTGACGGCAG ATGAACTCCG ACAATGGGTA
GAATCCACAG AACAGTTTCA GATGCGCCGA CTGGATATCG TTGCTTGCAG ACTCCAATCC
GAGGCGGTGG AACTTAAGTC CTGGCGTTTG GTGAGGGTGG CAGGCTTGCG CCCCGGCTAC
TCTCCGACTG TGGCAGCGCG CATTCAGGAT TTGGTTGGTT AA
|
|---|
| Protein sequence | MIAFFPEPYP DELLYSICAR YHIMSRNNDF RHTVEDLFGC RQACAVYDFP SRLAALCGRL
PRGSSHTPVS LIRNHTLFPL YQPFLTDNSA GKIAKDMVAS DQGGTIHCSI GVMASSIKSP
RFLRYCPVCK ESDITEFGEP YWHRAHQIAN LRACHRHGSP LSDSDAVISA PVNKHAFIAL
DYNPVIRTGN PSHGKLEMHI TVANAVSWIL QNNLPTLGFG RIVHAYHRFL KLRGLITCEG
HVRQEAFRQT FLNYYGEEFL QEVGCPLVNG GHQGWLAAMV RKRRNSAHPL HHLLLIQWLC
STPEVFYRAC LQIQPEIVVP NLLNLSGIHA QHHQPVSTAA DREASEISKG AALVQNSPLG
KRRREWLAIV RRSSGICRKQ LRAANQAAFG WLYRNDHDWL YDHLPAPLPR SKGQDLRVDW
DRRDQYLANE VRRSAQVILS EARPKQVTVT AIGTHIGCRT LIRRHLDKMP VTADELRQWV
ESTEQFQMRR LDIVACRLQS EAVELKSWRL VRVAGLRPGY SPTVAARIQD LVG
|
|---|
| |