| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0141 |
|---|
| Symbol | |
|---|
| ID | 6876091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 130607 |
|---|
| End bp | 131815 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642788020 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002218609 |
|---|
| Protein GI | 198282288 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTGATCC TCTGGGTGTG GAGAGCATCA TTTCCTTGTA GAGGGCGTAC GACTACCGCT
GTAGTTCCTG CCCGACTAGA GTGGCGAGCG CATACAATAA TAGTAGCAGC CCCTGAATCC
CACACATTTA GACCGAGCTT GGGATCCCTG TGCATTGTCC CGGGTTTGCT CAGGATTCAC
CTGCACCTGC CGCAGGAAAG CTATAGTGCA GGTCTGGACG TTCCAGGCAA TACGCAGCAG
ACTTGGTCAC ATTGGTTAGG CGTGCGGTGG CGAAGGGGAT GGGTGCTTTT CATGGCGACC
GCCCATCTCA CAGTCAGTAT ACAACATTAT TCTTCAACCG GCGTGCGCGT GAAATTTCTG
AGTATACAAC ATTATTATTT TTTTCTGGAG GGTGAAAAAT TCCAACTTGT TGACTATAAA
AAGATTGCAA GTATACAACT ATTTTTTATC TATACAATAG CCGAAGACTT CCGTGTGCGG
TTTGGGCAGC CACTAGATGC CGAGTCCCTA AATCAGAGTC ACCAGATCAT TATTGTAGCG
GCCTCGCTTG ATGAGCACAC AGAACGTATT GTCAGCTACC TGAGTAAACG AGATATTCCT
ATTAATGTGC TTTGCTTCCA AGTTTTTCAG AATGGCGAAG AACAAATTCT AAGTCGATCT
TGGCTACTGG ACCCTGCAAT GACCCAGATT AGTGCGGCCA CGAGCCTAGA GAGAGACAAG
GAACCCTGGA ATGGGGAATT CTATGTGTCT TTCGGGGATG GCCCCTCCAG GTCCTGGAAG
GATGCTGTGG AGTACGGTTT CATCTGCGCG GGTGGTGGTA CCTGGTATAG TCGTACTCTC
CAGCTTCTAA ATCCTGGTGA CCGAATATGG GTTAAGGCTC CAGGTTTTGG TTTTGTTGGG
GTCGGTGTAG TGACTGGCGA GGTCCGTCCT ATCAAGGATT TCATGGTGAC CACGGGTCAC
GGAGATGCGC ACGTTTATGA TGTGGCAAAG GGCGGATCGT ATCATTGGGA GTATGCCGAC
GACCCTGAGC GCTGCGAATA CTTTGTGCCC GTGAAGTGGC TGCAGACCGT GCCCGCAGAA
CAAGGCGTGC AAGGCGTAGG GCTGTTCGGC AATCAAAACA GCGTCTGCAA GCCAACCACT
CCCAAATGGC GATACACGGT GGATCAACTC AAGCTGAAGT TTCCTTCGTA TAGCCGTGAT
GGTGACTGA
|
|---|
| Protein sequence | MVILWVWRAS FPCRGRTTTA VVPARLEWRA HTIIVAAPES HTFRPSLGSL CIVPGLLRIH
LHLPQESYSA GLDVPGNTQQ TWSHWLGVRW RRGWVLFMAT AHLTVSIQHY SSTGVRVKFL
SIQHYYFFLE GEKFQLVDYK KIASIQLFFI YTIAEDFRVR FGQPLDAESL NQSHQIIIVA
ASLDEHTERI VSYLSKRDIP INVLCFQVFQ NGEEQILSRS WLLDPAMTQI SAATSLERDK
EPWNGEFYVS FGDGPSRSWK DAVEYGFICA GGGTWYSRTL QLLNPGDRIW VKAPGFGFVG
VGVVTGEVRP IKDFMVTTGH GDAHVYDVAK GGSYHWEYAD DPERCEYFVP VKWLQTVPAE
QGVQGVGLFG NQNSVCKPTT PKWRYTVDQL KLKFPSYSRD GD
|
|---|
| |