Gene Lferr_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0140 
Symbol 
ID6876090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp129170 
End bp129664 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content61% 
IMG OID642788019 
Productsingle-strand binding protein 
Protein accessionYP_002218608 
Protein GI198282287 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAG TGAATAAAGT GATCTTGTTG GGCCATCTGG GGCGAGACCC GGAGATGCGG 
TACATGCCAG ACGGGACGGC GGTCGCCAAT ATGACCATCG CCACGTCGGA GTCCTACAAG
GATCGGGACG GCAACCGCCA GGAGCGTACC GAGTGGCACC GCGTTGCACT CTTCGCGAGG
ACGGCGGAAG TCGCCGGTGA ATTTTTGCGC AAGGGGAGCC AGGCGTACAT CGAAGGGCGT
ATCCGCACCA GAAAATGGAC CGATAAGGAC GGTCAGGAGC GGTATTCCAC GGAGATCGTG
GGCGACCGGC TCCAGTTGAT CGGTGGGCGC TGTGACGGGG CCGATGGTGG CAATCCAGCG
CCACAGCATG GTGGTGGGGG TGGCGGGGAC ATGGGGGCTG CACCGATGGA GGAATTTGAC
GACGATATTC CGTTTATCAC CAAGGCGGAA ACTATCTTTC AACCACGCTG GCGGCTTCCG
CGAGTGCGGT TCTGA
 
Protein sequence
MAGVNKVILL GHLGRDPEMR YMPDGTAVAN MTIATSESYK DRDGNRQERT EWHRVALFAR 
TAEVAGEFLR KGSQAYIEGR IRTRKWTDKD GQERYSTEIV GDRLQLIGGR CDGADGGNPA
PQHGGGGGGD MGAAPMEEFD DDIPFITKAE TIFQPRWRLP RVRF