Gene Lferr_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0134 
Symbol 
ID6876084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp124221 
End bp124679 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content54% 
IMG OID642788013 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002218602 
Protein GI198282281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000191075 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACC ACATGGACGA CATCGGCGAT CGCGTCAAGA AAATCAGAAA GCGACTGGGA 
TTGACTCAGG CAGAACTGGG GAAGCATGCG GGCGGATTGA GTAAATCCGC TGTCCACCAG
TGGGAGAACG GTGGAACGAA GCCGGCATGG GATGCCTTAA CTGCTCTCCG AAAGAATTTG
GGCATCAATC CCGACTGGGT AATGCAGGGA GAGGGTGCGA TGCTCCAGGA GCTAGGGACA
CCTAACGCGG CAACGTCAAT AGAATCTGGC GCGGATGCGC TGCCGTTTGA CGGACGGGGA
CTAACGCCTA GACAGCGGGC GATGCTGGGG ATCTTCGACC GCCTGACGTC CAGTCAACAG
GATGAAGCCA TGCGAGAGCT TGAAGAAACT AAACGGAAGA ATGAAGAAAT AATTGAAGAG
CTTACCAGAC GAAAAACCAA CCATGCAAAT GGGTCTTGA
 
Protein sequence
MLDHMDDIGD RVKKIRKRLG LTQAELGKHA GGLSKSAVHQ WENGGTKPAW DALTALRKNL 
GINPDWVMQG EGAMLQELGT PNAATSIESG ADALPFDGRG LTPRQRAMLG IFDRLTSSQQ
DEAMRELEET KRKNEEIIEE LTRRKTNHAN GS