| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0127 |
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| Symbol | rimO |
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| ID | 6876077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 119749 |
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| End bp | 121077 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642788006 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_002218595 |
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| Protein GI | 198282274 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0233399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TTCCTAGTAT AGGTGTAGTA TCTCTTGGGT GCCCCAAGGC CACGGTGGAC
AGCGAGCGCA TCCTCACCCA GTTGCGCGCC GAGGGCTATC TGCTGGTGGG GGATTACGCC
AACGCCGATG TGGTCGTCGT CAATACCTGC GGCTTTATCG ACGCGGCGGT GGAGGAATCC
CTGGAGGCCA TCGGCGAGGC GCTGGATGAG AACGGCAAGG TGGTGGTCAC CGGTTGCCTG
GGTGCCCGCG AGGGCGGCGA CTTTGTGCGC GGCGCCCATC CCAAGGTGCT TGCCGTCACC
GGCCCCAACC AGGCTGGCGC CGTGCTCGAC GCGATCCATG CGGCACTCCC TCCGGCCCAC
GATCCCTACA CCGATCTGGT GCCGCCCCAG GGCCTGCGCC TGACGCCGCC CCACTACGCC
TACCTCAAAA TCTCCGAGGG CTGCAATCAG TCCTGCAGTT TCTGCATCAT TCCCAGCATG
CGCGGCAAGC TGGTCAGCCG TGCGCCGGAC GATATTCTGC GCGAGGCCGA GGCGCTGGTG
GCGGGCGGCG CCAAAGAACT GCTGGTGATT TCTCAGGACA CCGGCGCTTA CGGGGTAGAC
CGCAAATACC GCACCGCCTT TCACAACGGC CGTCCGCTCA AGACCCGCAT CACCGATCTC
TGCGCGGCCC TGGGGGAACT CGGCGTCTGG GTGCGTCTGC ACTACGTATA CCCCTACCCG
CACATCGACG AACTCCTGCC CCTGATGGCG GAAGGCAAAA TTCTGCCCTA TCTGGATGTG
CCCCTGCAGC ACGGCAGTCC GCGCATCCTC AAGGCCATGC GTCGCCCTGC CGCCGCCGAA
AAAACCCTCG ACCGGATTCT CGGCTGGCGC CAGGCGGTGC CCGACCTGAT CATCCGCAGC
ACCTTCATTG TCGGCTTCCC CGGCGAGACC GATGCGGACT TTGCGGAGTT ACTGGATTTT
CTGCGGGCGG CAGAGCTGGA TCGGGTCGGT TGTTTCGCCT ATTCCGCTGT AGAAGGCGCG
CCCGCCAACG CGATCGCCGG AGCGGTGCCG GAGCCGGTCA AAGAGGAACG CCGCGCCGCA
TTCATGGCCG TGCAGGAAGC CATCAGCCGC CAGCGGCTAC AACGCCGGGT GGGCCAGCGT
CAGCGGGTAC TGGTGGATGC AATGGCCCGG GGCGGCAGAG TCATCGCCCG CTCCGCCAGC
GATGCCCCGG AGATCGATGG TGTGGTGCAT CTGGGCAAGG CGGCGGGGTT GCAGGTCGGA
GACTGGGTGG AGGTGGCGAT CACCCGGGCG GATGCCCATG ATTTATATGG GATGGTGGTG
TCGGCCTGA
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| Protein sequence | MKKIPSIGVV SLGCPKATVD SERILTQLRA EGYLLVGDYA NADVVVVNTC GFIDAAVEES
LEAIGEALDE NGKVVVTGCL GAREGGDFVR GAHPKVLAVT GPNQAGAVLD AIHAALPPAH
DPYTDLVPPQ GLRLTPPHYA YLKISEGCNQ SCSFCIIPSM RGKLVSRAPD DILREAEALV
AGGAKELLVI SQDTGAYGVD RKYRTAFHNG RPLKTRITDL CAALGELGVW VRLHYVYPYP
HIDELLPLMA EGKILPYLDV PLQHGSPRIL KAMRRPAAAE KTLDRILGWR QAVPDLIIRS
TFIVGFPGET DADFAELLDF LRAAELDRVG CFAYSAVEGA PANAIAGAVP EPVKEERRAA
FMAVQEAISR QRLQRRVGQR QRVLVDAMAR GGRVIARSAS DAPEIDGVVH LGKAAGLQVG
DWVEVAITRA DAHDLYGMVV SA
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