| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0117 |
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| Symbol | |
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| ID | 6876067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 112309 |
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| End bp | 113193 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642787996 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_002218585 |
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| Protein GI | 198282264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGCG CTCAGGCTCG TGCGGGGGAT GCCAGTGCAT TACGCACCCT TGAAAAGGCA
GCTAAAAGCG GGGACAAAAC CGCCGAAAAC TGGCTAGGAA TTTACTACGG TGTTCAGAAA
AAATATCGCA AGGCGGTATT CTGGTCGCGC AAGGCAGCCA TTCAAGGTGA CCCGTTGGCC
GAGTTTGTCA TGGGCGAGGT GTACTACTAC GGTAATGGCG TCCCGAAAAG CGACCGCACT
GCATTGTATT GGTATAAATT GGCAGTAGCC CAAGGCTATC AGGGTGCGCA ACCCATGCTG
ACCAAAGTAC GGCAAGAGAT TGCTGCGCAG GCGGAGTTGC GCGACCACAC TCAGGTCGTC
GCTCGAACAG ATGAACAGCC ACCCGCAGGG ACAAGCAGTT CTACATCTGT GACGCCGATT
TCTGACAACA AGGTTGTCAG TACCCCTGCG ATCAAGTCGA CAACACCAAT GGCAGTAACT
CGTCCTTCAT CCGCCCTCCT GACAGCCAAA GAACAAAACC TTCTGGGCTA CGCCTACTAT
AGTGGCCAGG GCAAACCCAA AAATTATGAA AAGGCGGTTT ATTGGTACCG CAAGGCGGCT
GCCCAAGGTG ATGCGAGTGC TGAGAACAAT CTGGGTGTGG CCTATAACTA TGGTAATGGA
GTGGACAAAA ATTTTTCACG CGCTGTGTAC TGGTATCGAA AAGCTGCTGA TCAGGGGAAT
CCCAGTGCCC AAACGAATCT GGGAGTTGCC TATTACCAGG GCGACGGAGT GAAAAGTAGC
ACCACCGAGG CTCTCCACTG GTGGACGAAA GCTGCCAAGC AGGGCGATGC GCGTGCACGT
AGCTATTTGA ATGTGGTAAA ACTGACGTCA CGGGGGACTA AGTAA
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| Protein sequence | MLSAQARAGD ASALRTLEKA AKSGDKTAEN WLGIYYGVQK KYRKAVFWSR KAAIQGDPLA
EFVMGEVYYY GNGVPKSDRT ALYWYKLAVA QGYQGAQPML TKVRQEIAAQ AELRDHTQVV
ARTDEQPPAG TSSSTSVTPI SDNKVVSTPA IKSTTPMAVT RPSSALLTAK EQNLLGYAYY
SGQGKPKNYE KAVYWYRKAA AQGDASAENN LGVAYNYGNG VDKNFSRAVY WYRKAADQGN
PSAQTNLGVA YYQGDGVKSS TTEALHWWTK AAKQGDARAR SYLNVVKLTS RGTK
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