| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0110 |
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| Symbol | |
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| ID | 6876060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 103541 |
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| End bp | 104623 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642787989 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002218578 |
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| Protein GI | 198282257 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGG CCTTTTTCTT ACTGGGTATC GTTGTCGTGC TGCTTTTTGG CGGTGTTTAT
GGCTGGTATC AATGGCGTCA GGGTCGGTTG CACACACGCC TGGCGGCGGC GGCCAACCCG
GTGGTCACCG TTTCTGCCAC GCGCGCGCAA AACGAGTCGA TGGCGGGTGA GTTGACCGCC
GTGGGCGAGA TCGTGCCGCA ACAGGGAGCG GTGCTCAGTC CTCAGACCGG GGGGGTGGTG
CAGCATATCG GCTTTCACTC CGGTGCCACA GTGCAAAAGG GACAACTGCT CCTGTCTCTC
GACCCCGGCG CTTTGCCTGG CCAGTTGCAG GCCGCCAAGG CCGAGGCCGA CCTCGCGCAG
GTGGATTATC AGCGCGCCGA GAAGGTCTTT GCCATCCACG GCATCTCTAC CGCTGCACTG
GATAAGGCTC GCTATGGTGC CAGCGTGGCC CAGGCCCGGG TGACGGCCTT GCAGGAGTCT
CTGGCGGATA CGCAGATCCG TGCCCCTTTC AGCGGAGTAT TGGGGTTGCG TACCGTGAAC
CTGGGGGAAT ATGTCCATGC GGGTATGCCG GTGGTGCATA TCGAAAACCT GCAGACGCTC
TACGCCGATT TCACGGTACC TCAGCGTGAT GTGCAGGCGG TGCGGGCGGG CGGGCCGATA
CAACTTGACG TGCATGACGG GATTATCCTG CGCCATTACA GTGCCAAAGT GCAGGCAGTT
TCCAGTCATG TGGATGCGCA AAACCGGGCA GTCAGCGTTC GCGCCCTCGT CGATGCGCCA
CTGGGCTTGA AACCGGGCAT GTTCGTCCGC GTCGTCCTGC AAAAGGAGGC ACCCACGGCA
CGCCTGATGA TTCCTACGGT GGCAGTAAGC TTCAATACCT ATGGGGACTT TGTCTATGTG
CTGACCCCGG GACCGGACCG TACCCTGATC GCCAAAGAGC AGCCGGTGAC CACGGGCCTG
CAGCGCGGTA ACCAGGTGGT GGTCCGTTCC GGCCTCAAGG CGGGCGACCT GGTAGTCACC
GCGGGGCAGG TCAAACTGCA CAGTGGTGAC CATGTGCGCA TCAATAACGC TGTGCATCTC
TGA
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| Protein sequence | MKKAFFLLGI VVVLLFGGVY GWYQWRQGRL HTRLAAAANP VVTVSATRAQ NESMAGELTA
VGEIVPQQGA VLSPQTGGVV QHIGFHSGAT VQKGQLLLSL DPGALPGQLQ AAKAEADLAQ
VDYQRAEKVF AIHGISTAAL DKARYGASVA QARVTALQES LADTQIRAPF SGVLGLRTVN
LGEYVHAGMP VVHIENLQTL YADFTVPQRD VQAVRAGGPI QLDVHDGIIL RHYSAKVQAV
SSHVDAQNRA VSVRALVDAP LGLKPGMFVR VVLQKEAPTA RLMIPTVAVS FNTYGDFVYV
LTPGPDRTLI AKEQPVTTGL QRGNQVVVRS GLKAGDLVVT AGQVKLHSGD HVRINNAVHL
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