Gene Lferr_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0106 
Symbol 
ID6876056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp98398 
End bp99663 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content62% 
IMG OID642787985 
Productnatural resistance-associated macrophage protein 
Protein accessionYP_002218574 
Protein GI198282253 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID[TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTG CGCCCGCTGC CCGCAATATC CAATCCCTGG CCCATCGCTC GCGCTGGGGT 
ATCTTCCTCG CGGTACTGGG TCCCGGCCTG GTGGTCATGC TCGCCGATAC CGACGTCGGC
AGCATCATCA CCGCCGCCCA GAGTGGCGCA CAATGGGGCT TCAAGCTGCT GCTCCTGCAA
TTCGTCCTCA TGCCTATTCT CTACATCGTG CAGGAGCTGA CGGTCCGTCT CGGCATTTTT
ACGGGTAAAG GACACGGTGA ACTGATTAGC GAAACCTTCG GGAAAGGCTG GGCCTATCTC
TCCGTCGCCG GTCTCAGTAT CGCCACCACC GGCGCCTTGC TGACGGAATT TTCAGGAGTC
GCGGGCGTCA GCCATCTCTA TGGCTTGCCG CGCTGGGTCG GGGTTGCCCT GGCCGCAGCC
ACCCTGCTGA TCGTCGTCTG GACCGGTTCG TATCGACGCG TCGAACGCAT CGCCTTGATC
ATGGGCCTCT TTGAGCTGGT CTTTTTTGGT ATCGCCTGGG CCAGTCATCC CAGCATCCAT
GAAATCCTGG ATGGCCTGCT GCACGCCCCC ATCACCAACG ACCACTACAT GATGCTGGTC
GCCGCCAATA TCGGTGCCGT CATCATGCCG TGGATGGTGT TCTACCAGCA GTCGGCAGTG
GCTGATAAGG GTCTGCACCC CGAACATTAC CGCCATGCCC GTTGGGATAC CGCGTTCGGC
GCGATCATTA CCCAGGCGAT CATGGCGGCG GTGCTGATCG CCACAGCCGC CACCATTGGC
CGCCTCAACC CCAACGCACC CCTCAATACG GTGCATCAGC TCTCGGAGGC CATCATTCCC
TATCTCGGCA ACACCTGGGG ACGGATTGTG TTTTCCCTGG GCATCCTTGG GGCAGGTATG
GTGGCGGCCA TCGTCGCCTC CCTCGCCGGG GCCTGGGGTT GGGGGGAAGT CACCGGCTTT
CGCCACTCCC TGGAGCATCA CCCCAAAGAT GCGCCCTGGT TTTACGGGAT CTACACCACC
ATCATCGCGG CTGGCGCCGC GGCAGTGATC ACCATCCCCG ACCTCGTCAG CCTCGACATC
GGGGTCGAAG TGATGAATGC GCTGCTCCTG CCCCTGGTGC TGGGCTTTCT GGTGGCCCTG
TCCATCAAGG CGCTGCCCGC CGAACACCGC TTGCGCGGCC CCTATCTCTG GCTGGTGCTG
TTCGTGGTGA TTCTGGCGGG GGGGTTGGGA GTTTACGGAG GATTGAACAG CATTCCGGGT
TGGTAG
 
Protein sequence
MSAAPAARNI QSLAHRSRWG IFLAVLGPGL VVMLADTDVG SIITAAQSGA QWGFKLLLLQ 
FVLMPILYIV QELTVRLGIF TGKGHGELIS ETFGKGWAYL SVAGLSIATT GALLTEFSGV
AGVSHLYGLP RWVGVALAAA TLLIVVWTGS YRRVERIALI MGLFELVFFG IAWASHPSIH
EILDGLLHAP ITNDHYMMLV AANIGAVIMP WMVFYQQSAV ADKGLHPEHY RHARWDTAFG
AIITQAIMAA VLIATAATIG RLNPNAPLNT VHQLSEAIIP YLGNTWGRIV FSLGILGAGM
VAAIVASLAG AWGWGEVTGF RHSLEHHPKD APWFYGIYTT IIAAGAAAVI TIPDLVSLDI
GVEVMNALLL PLVLGFLVAL SIKALPAEHR LRGPYLWLVL FVVILAGGLG VYGGLNSIPG
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