| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0100 |
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| Symbol | |
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| ID | 6876050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 92056 |
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| End bp | 94248 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642787979 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_002218568 |
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| Protein GI | 198282247 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit
[COG2259] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAGGG CAGAGCGAAG CCTCCGCGAC CTCGCCACCC GGTGGCTGCC GGCTCCGACA
GGCGCCCTCG CTGCCACCTA CCGCTTGCTG GAGCATTCGG GCGGACCTGT GGTGGACCTC
CTGATCCGCC TGTGGCTGGC GAAAGTCTTT TTTGTGTCGG GCGTATTAAG GATTTTCGGC
CTGAGCATCG AGCCCTACCT GTCCGGTGCG GCATATCCCG TGCCGTGGGT GGAGCCGCTC
AGCCCCACCT ATCTGGGCGC CGCGATACAG ATGATCATCC CGATGTTGCT CGCGCTGGGG
TTGGCAACCC GGTGGGCCGC GCTGTACATG CTCATTCTCG TGCTGGTGGT CCAGTTCAAC
TACCTCGCTC TGGATATCAA CCTGTACTCG GCGGTGCTGT TCGGGTGGTT CGTGATATGT
GGTGCGGGGC CACTGTCGCT GGACCATCTC CTCGCCCGAG GATTGGGGGA TACCGCGCTG
CCCTTCGCCA CGGCGCTGAC CCGCCTGGCG GGCGCCGTTA CGCGATATCT CAGGCCGTAC
TATCAATTGC TTATCCGTCT GTGGCTTGGG TTGGCACTGC TGGCGGCAAG TACGGAAACC
TCGATACCCG TCGGGCTGAC AAAGCTGCTT CCGGAAAAGT CGCTGGCCCA TTTTGCCCCG
GCGCCCACGC TGGCGCTGGT GGGCGCGCTG CTCGTGACTT TCGGCCTGGC CGCCCGCCCC
GCCGCACTAC TGCTTATGCT GGCCGTTGCC GGGATGCATG CAGCCGGCGC GGCTGATCCG
GCGGATGTCT ATTTCATGAT GACGCTGGCA CTGGTTGGCC TGTATGGGCC GGGCGATCTG
TCGCTCGACA AATGGATTTC GGCTATCCTC CCGCAGATCA GCGGCAGGCA GACATGTCCG
CCGGAGGGTG CGCCGCACGT GGTGATCGTG GGCGCCGGCT TCGGTGGGCT GGCATGCGCG
GCGCGGTTGA CCAAAACGCC GGTGCGGGTG ACCCTGATCG ATCGCCATAA CTACCACTTG
TTCCAGCCCT TGTTATATCA GGTCGCCACG GCTTCGCTTT CCCCTGCCGA TATCGCCGCT
ACGGTGCGTG GCCTGTTTTG CGATCACCTC AACGTACAGG TGCTGCTGGG TCAGGTGACC
GGGATCGATA CCACGCAACG GGCGGTGTTG ATCGGCAAAC GACGCCTGTC ATACGATTAC
CTGGTGCTTG CTACGGGCGC GTCCCACAGC TATTTCGGAC GGGACGAGTG GGAGCCTTAT
GCGCCGGGAT TGAAGACCAT CGACGATGCG GTGGAAATAC GGCGACGGAT TCTCTCCGCC
TTCGAACAGG CGGAATCTGC CGAAGATCCC GCCGAGCGTC TGGGCCTGCT CACCTTTGTG
ATTGTGGGAG GCGGACCAAC AGGGGTCGAG CTGGCAGGCG ACATTGCCGA ACTGGTGCGC
CACGGCATGG AGAAGGAGTT CCACTATTTC GACCCGGCCA GCGCCCGCGT GGTTCTGATT
CAGTCGGCTG CGCGCATCCT GCCGACTTTT CCCGGAGTAT TATCAGAAAA GGCGCAGCGC
TCACTCGAAC GGCTGGGCGT CGAGGTCATG CTGGAAAGCA GGGTAGAGCA CATTGATCAG
GAGGGAGTGC GCATCAACGG CGAACGCCTG GCGTCTCGCA CGGTATTGTG GGCGGCGGGG
GTCGTGGCAT CCCCGGCGGC GCGATGGCTC AACGCTGCAG CCGACCGCAG CGGCAGGGTG
AAAGTCGAAC CGGACCTCTC GGTAGCCGGT CTGCCAAACG TGTTTGTCAT CGGTGACACC
GCGCTGGCCA ATGCCTGGAA GGGAAAACCG GTGCCCGGCC TGGCACCGGC GGCGAAGCAG
GGCGGGGCCT ACGTGGCAAG AACGATTCGC CGAAAACTAC AAGGACAGTC GGAGCAACCG
CCATTTGCAT ACCGCCACAT GGGCAGCCTC GCCACCATCG GCAGGAAAGC TGCAGTGGCA
AGCTTCAACG GCGTCAACGT GAGCGGCGCA TCGGCCTGGT GGCTATGGGG CCTGATTCAT
GTAGCTCTTC TCGTGGGTTT GCGCAACCGC ATCTCGGTGA TGTTCAACTG GTTCTGGGCC
TATCTCACGT TCAAACGGGG CACCCGCCTG ATCACGGGAA ACGAGGCGTC TCTGGCAGAA
AATCCTGTCA TAAGGACCAT CGAACGGCCC TGA
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| Protein sequence | MNRAERSLRD LATRWLPAPT GALAATYRLL EHSGGPVVDL LIRLWLAKVF FVSGVLRIFG
LSIEPYLSGA AYPVPWVEPL SPTYLGAAIQ MIIPMLLALG LATRWAALYM LILVLVVQFN
YLALDINLYS AVLFGWFVIC GAGPLSLDHL LARGLGDTAL PFATALTRLA GAVTRYLRPY
YQLLIRLWLG LALLAASTET SIPVGLTKLL PEKSLAHFAP APTLALVGAL LVTFGLAARP
AALLLMLAVA GMHAAGAADP ADVYFMMTLA LVGLYGPGDL SLDKWISAIL PQISGRQTCP
PEGAPHVVIV GAGFGGLACA ARLTKTPVRV TLIDRHNYHL FQPLLYQVAT ASLSPADIAA
TVRGLFCDHL NVQVLLGQVT GIDTTQRAVL IGKRRLSYDY LVLATGASHS YFGRDEWEPY
APGLKTIDDA VEIRRRILSA FEQAESAEDP AERLGLLTFV IVGGGPTGVE LAGDIAELVR
HGMEKEFHYF DPASARVVLI QSAARILPTF PGVLSEKAQR SLERLGVEVM LESRVEHIDQ
EGVRINGERL ASRTVLWAAG VVASPAARWL NAAADRSGRV KVEPDLSVAG LPNVFVIGDT
ALANAWKGKP VPGLAPAAKQ GGAYVARTIR RKLQGQSEQP PFAYRHMGSL ATIGRKAAVA
SFNGVNVSGA SAWWLWGLIH VALLVGLRNR ISVMFNWFWA YLTFKRGTRL ITGNEASLAE
NPVIRTIERP
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