Gene Lferr_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0081 
Symbol 
ID6876030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp79738 
End bp80760 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content50% 
IMG OID642787960 
Productglycosyl transferase family 2 
Protein accessionYP_002218550 
Protein GI198282229 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATGG AAGAAACCAA CAGCGCTAAA GGTGTTACAG TGGTCACTGT AACATATGGC 
GAACGTCGGC ATTTTCTGGA GCCCATGTTG CGTGCAACAT TAGCCCAAGG TGTAGAAAGG
ATCATCCTTG TCAACAACGG CACCAATTGG GATGTGGCAG GACTTGCGAC AGAGATCGAT
CGTACGCGCA TCGAGCTCGT TCAATCAAGT AAAAACATGG GCTCTGCCGC TGGTTTTTCC
ACTGGGATAT CTAAAGCCCT GGAGCAAGGC GCCGAGATGA TTTGGTTATT GGACGACGAC
AATAGGGCAA CCGAGGGGTC CTTGAAGGTG CTACTCGGTG CCTATGCAAA GTTGCGGGAG
ACACACCCCC ATGAGGAGTT CGCCGCCCTA GCTTTTCGGC CCGAGCATCA AGCTGACGTT
ACCATGGGAG CATCCCAGCG GCGGGTCAAT CCACGGCGCT CCAGCTTTCT TGGTTTCCAT
ATTTTTGACA TTCCTCATAA ATTTTGGCGG CGGACGCCGC TGGGCAAGCG GCGTCCGAAC
CAAGCGTTGC CCAAAATAAT CCGGCTGGAC ACAGCCATTT ATAGTGGTCT CCTCTTTCAT
CGTAGGCTAG TTGATCGTAT TGGTTTACCT CGGACGGACT TCGTTCTCTA TGGTGACGAT
AATGAATTCA CTTACCGCAT CACCCGGTAT GGGGGTGGTA CCTACCTGAT CACCGGAGCG
TTGCTGGAAG ATATGGAATC ATCTTGGAAT GTTAAGCGCC GACATAGCAA TTCCTTTTCT
GGCCTGTTGA AAGGAGAAGG CGACTTTCGA GCCTATTATG GTATGCGCAA TGGCGCTTTT
TTCGATACTT ATTGCAAAGA TCATAATCCA ATGATGTATG CCATCAATCT TAGGTTTTAT
CTTGCTATTC TTTTTCTATT CTCCCGTATA TACAATCGCC ATGAGCGTTA TCGCTTGCTT
TCCCAAGCGG TGAAAGACGG CCTCGCGAAG AGGCTTGGCC TCCATTCAGA TTATCCGTTA
TGA
 
Protein sequence
MVMEETNSAK GVTVVTVTYG ERRHFLEPML RATLAQGVER IILVNNGTNW DVAGLATEID 
RTRIELVQSS KNMGSAAGFS TGISKALEQG AEMIWLLDDD NRATEGSLKV LLGAYAKLRE
THPHEEFAAL AFRPEHQADV TMGASQRRVN PRRSSFLGFH IFDIPHKFWR RTPLGKRRPN
QALPKIIRLD TAIYSGLLFH RRLVDRIGLP RTDFVLYGDD NEFTYRITRY GGGTYLITGA
LLEDMESSWN VKRRHSNSFS GLLKGEGDFR AYYGMRNGAF FDTYCKDHNP MMYAINLRFY
LAILFLFSRI YNRHERYRLL SQAVKDGLAK RLGLHSDYPL