| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0069 |
|---|
| Symbol | |
|---|
| ID | 6876018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 70690 |
|---|
| End bp | 71379 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642787948 |
|---|
| Product | exsB protein |
|---|
| Protein accession | YP_002218538 |
|---|
| Protein GI | 198282217 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
|---|
| TIGRFAM ID | [TIGR00364] exsB protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.955333 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACGC CCGCCACACC CGCCATTGTA CTGCTCTCCG GCGGACTGGA TTCCGCCACC
GTGCTGGCGC TCATGCGCCG GGACGGCTTT GCGGTCCACG CCCTCTCTTT TGACTACGGG
CAGCGGCATA AGGAAGAGCT GCGCTATGCG GCGCTGCTGG CGCAGTCCAT GGGGGCGGCC
AGCCACCGGG TGCTGCGTAT CGATCTGGCG GCCTTTGGCG GCTCAGCGCT GACCGATCCG
CAACTCAGCA TTCCCGAGAC CGGCCTGGCG CCGGGCATCC CCATCACCTA TGTGCCCGCG
CGCAATACCG TCTTTCTGTC GCTGGCCCTG GCGCTGGCGG AGGTGCTGGG CGCCAGGGAT
ATCTTCCTGG GGGTGAACAG TCAGGATTAC AGCGGTTATC CCGACTGCCG GGCGGAGTTC
GTCCAGGCTT TTGAGGCCCT GGCGCAGGTG GCCACCCGCC TCGGCGATGA AGCCCGCGGG
CCACGTATCC ATGCGCCGCT GCAGTTTCTC AACAAGAGCG AGATTATTCG TCTCGGCAGC
CGTTTGGGTG TGGATTACGG AATGACCCGC TCTTGCTATC AGTTGGATGC CGAAGGCCGG
TCCTGTGGTC GCTGTGACAG TTGCCGCCTG CGCCGGGAAG GATTCCGTCA GGCCGGCATC
GCCGACCCCA CGCCTTATCA GGATTCCTGA
|
|---|
| Protein sequence | MPTPATPAIV LLSGGLDSAT VLALMRRDGF AVHALSFDYG QRHKEELRYA ALLAQSMGAA
SHRVLRIDLA AFGGSALTDP QLSIPETGLA PGIPITYVPA RNTVFLSLAL ALAEVLGARD
IFLGVNSQDY SGYPDCRAEF VQAFEALAQV ATRLGDEARG PRIHAPLQFL NKSEIIRLGS
RLGVDYGMTR SCYQLDAEGR SCGRCDSCRL RREGFRQAGI ADPTPYQDS
|
|---|
| |