Gene Lferr_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0067 
Symbol 
ID6876016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp68434 
End bp69387 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content64% 
IMG OID642787946 
Productprotein TolA 
Protein accessionYP_002218536 
Protein GI198282215 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAAC GCAAGTCAGC CTGGCCGCTG GTGCTGGCTA TCGTGCTCAA CGGCGCGATA 
CTGCTGGCTC TGTTCTGGAG CTATCACATC AATGTGCCCG AGGCCGGGGG TACCCCCATG
CAGGCGCAAC TGAGCGGCGG CATGCCGGCG GCGCCGGTAC CTCAGCCCGT GCCCAAACCC
GCGCCGGTAC CGCAGCCGGC GCCCGCCCCA GTGCCAAAGC CGGCACCGGT GCCGAAACCC
AAGCCAGCCG CTCCGCCGCA GCCCAGCGCC GCGCAGATTG CCGCGGAAAA AGCGGCGCAA
CAAAAGGCCG CAGAGCAGAA GGCCGCACAG ATCACCGCCG AAAAACACGC CGCCGAAAAG
CAGGCTGAGA AACTGGCCGC GCAACGGGCG GCCGAAAAAG CCGCCGCGGA AAAGGCGGCT
GCACAAAAAG CTGCTGCGCA GAAAGCCGCC GCCGAAAAGG CCGCCGCCGA AAAACAGGCG
GCGCAAAAAG CGGCCGCTGC ACAGCGCGCG GCGGAGCTGA AGCGGCAACT CGCCCGGCAG
CAGGCAAAGG CCGCGGAAGC CGCGCGGGCC AAGGCGCTGC AGCAGCAGAT GGAGGCCGGG
GCCAAGCTGC GGGCCGAGGC CAACATGGCC GCGGCCCGCG CCCAGCAGGC GGCGGAAAAT
CAGCGTATGC TCGGGATGTT GATCAACACG ATCAAAACGC GGGTATCAGA GAAGTGGAGT
ACTAATTTTT CTCCCGCCTT GTCCTGCGTA TTACAAATCC ATCTCGGACC TCAGGGTCAA
CTCCTGGGTG CCCCGGTCGT AGTGCGTTCC AGCGGTAATC CCGGCTTCGA CCGGTCTGTA
ATCGCAGCAG TGGAAGCAGC AGCGCCATTC GTACCACCCA TCGGGCTGGC TTACAGCACC
TTTAATCAGC CGATAAACCT TAAAATGAAT GCGGAGGATC TCAATCATGG CTAA
 
Protein sequence
MKKRKSAWPL VLAIVLNGAI LLALFWSYHI NVPEAGGTPM QAQLSGGMPA APVPQPVPKP 
APVPQPAPAP VPKPAPVPKP KPAAPPQPSA AQIAAEKAAQ QKAAEQKAAQ ITAEKHAAEK
QAEKLAAQRA AEKAAAEKAA AQKAAAQKAA AEKAAAEKQA AQKAAAAQRA AELKRQLARQ
QAKAAEAARA KALQQQMEAG AKLRAEANMA AARAQQAAEN QRMLGMLINT IKTRVSEKWS
TNFSPALSCV LQIHLGPQGQ LLGAPVVVRS SGNPGFDRSV IAAVEAAAPF VPPIGLAYST
FNQPINLKMN AEDLNHG