Gene Lferr_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0059 
Symbol 
ID6876008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp63209 
End bp63820 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID642787938 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_002218528 
Protein GI198282207 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0471186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCAAC CGTCTGCGGT GGCCGACCAG GCAACGGAAT GGTCCTTTAC CCAGCGTGGC 
CTACATGCCC TGCTTTATGG CTACACCCGC TTTTATCAGG GAGGCCGCTG GGAGCGCAGC
AGCGTTCCCG AGACCGGACC GGCCATCCTC GCCTGCAACC ATGTTTCCGT GCTCGACCCT
TTATTCCTGG TGGCCAGCAA TCAGCGGATC ATTTCCTTTC TGGTCGCGCA GGAATATTAC
GACAAGGCCT GGGTGCGCCG CCTACTGGAG CAGACCTACA GCATCCCCGT ACGCCGCGAC
CGTCGTGACG TGGCCGCCCT CCTGCAGGCG CGACGGATGC TGGAAGACGG ACGGGTGCTG
GGCATATTTC CCGAGGGCGG GATCAACCGC GAGGAAACCC AGAAAGGCCT TGCCTGGCTG
GTGCGGGAAA GCGCCGCGCC GGTGGTGCCC GCCCATATCA GTGGCGCGCG ACAAGGCCGC
TCGGACTTCA GCACCTGGGT ACACCGCCAG CGGCCTTTGC TGCGTTATGG GGTGCCTCTG
CATTTTCATC CGGATGCTCA CGCCGATGAG GTGCTCGGCG CCACCATGAG CGCCATCGCC
ACGCTCGCAT GA
 
Protein sequence
MGQPSAVADQ ATEWSFTQRG LHALLYGYTR FYQGGRWERS SVPETGPAIL ACNHVSVLDP 
LFLVASNQRI ISFLVAQEYY DKAWVRRLLE QTYSIPVRRD RRDVAALLQA RRMLEDGRVL
GIFPEGGINR EETQKGLAWL VRESAAPVVP AHISGARQGR SDFSTWVHRQ RPLLRYGVPL
HFHPDAHADE VLGATMSAIA TLA