Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0057 |
Symbol | |
ID | 6876006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 60227 |
End bp | 62017 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642787936 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_002218526 |
Protein GI | 198282205 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000241419 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGACAC ACTATTGTAA CGGCATTCAC GAAGGCCTGA TCGGCCAGAC GGTCACCCTC TGCGGCTGGG CGCAACGGCG TCGCGACCAC GGTGGCGTCA TTTTCATAGA CCTGCGGGAC CGCGAAGGTC TGGTGCAGAT CGTCGCCGAT CCGGACCAGG TCGACGCCTT CGCGGCCGCC AACGAATGCC GCAGCGAGTT TGTGCTGCAG GTCGAGGGTG TTCTCCGTGC CCGTCCCGCG GGTACCGAGA ATCCCCACAT GCCCAGTGGC AAGGTCGAGC TGGCCGCAGC GCGCATCCGT ATTCTCAACC GATCCGAGCC GGTCCCCTTC CCCCTGGATG AGGAAGACAT CGCCGAGAAC CTCCGGCTCA AGTACCGCTA TCTCGACCTG CGCCGTCCGG AAATGCTCCA TCGTCTGCGC CTGCGCCATC AGGTCACCCG CTTCGTGCGC GGCTATCTGG ACAATGCCGG CTTTATCGAC GTGGAAACCC CCGTCCTTAC CCGCTCCACC CCCGAAGGCG CCCGTGACTA TCTGGTGCCG TCGCGCACCC AGCCGGGACA CTTTTTCGCG CTGCCCCAGA GCCCGCAGCT CTTCAAGCAG CTTCTGATGG TGGCGGGACT GGACCGCTAT TACCAGATCA CCAAGTGCTT CCGCGACGAA GACTTGCGAG CCGATCGTCA GCCGGAATTC ACCCAGATCG ATATCGAGGC CTCGTTTGTC GATGAAGAGG CCGTCATGGG GACTGCCGAG CCCATGATTC GCGGGCTGTT TGCCGAGGTG TTGGGCGTGC AGTTGCCCGA TCCCTTCCCG CGGATGACCT ACCGGGACGC CATGCACCGC TTCGGCGTCG ATCGCCCCGA TCTACGCAAT CCGCTGGAAC TGACAGAGCT CACCGATCTC ATGCGCGCGG TGGACTTCAA AGTGTTCCGC GAAGCCGCCG AACGTCCGCA TGGGCGGGTG GCCTGCCTGC GGGTGCCCGG TGGCGCCCAG CTCAGCCGGG CGCAGATCGA TGCCTATACC CAGTTCACCG CCATCTACGG GGCCAGGGGC CTGGCCTGGA TCAAGGTGAA TGCCCTGGAT CAGGGTAACG AAGGCCTGCA ATCCCCCATC GTCAAGTTCC TGCCGGAAAT GGTCCTGAGC GAAATCCTCC GGCGCAGCGG CGCAGCGGCG GGCGACATCC TCTTTTTCGG CGCGGATACC GCCAAAATCG TCAACGAGGC TCTCGGCAAC CTGCGTAACC GTGTCGCCGC TGATCTGGGT TTGCTGGAGG GCGAATGGTG CCCGGTCTGG ATCACCGACT TCCCCATGTT CGACTATGAC GACAAGGAGG ATCGCTGGAC TTCCACCCAT CATCCTTTTA CCGCGCCGCA GACGGAACAC CTGGAAACCC TCGGTCAGGA TCCCGGCAAT GCCTTGGCGC GGGCCTACGA TCTGGTGCTC AATGGCAACG AGATCGGCGG CGGCAGCATC CGCATCCATC AGGAGGCGGT ACAGGAAAAG GTCTTCGCCG CCCTCGGTAT CGGGGCGGAA GAAGCCCGGG ACAAATTCGG CTTCCTGCTC GATGCCCTGC ATTATGGGGC GCCACCCCAC GGTGGTCTGG CTTTCGGGCT GGATCGACTG GTGATGCTCC TGTGCGGCGC CGAGACCATT CGTGACGTGA TCGCCTTTCC CAAGACGCAA AAGGCCGGTT GCCTGCTCAC CGAAGCCCCC GGTACGGTCG CCGACAAGCA GCTTCAGGAA CTCGGCATCC GCCTGCGCCC CGGTGTCGGG GGTGGCGTTC CCAATCCCTG A
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Protein sequence | MRTHYCNGIH EGLIGQTVTL CGWAQRRRDH GGVIFIDLRD REGLVQIVAD PDQVDAFAAA NECRSEFVLQ VEGVLRARPA GTENPHMPSG KVELAAARIR ILNRSEPVPF PLDEEDIAEN LRLKYRYLDL RRPEMLHRLR LRHQVTRFVR GYLDNAGFID VETPVLTRST PEGARDYLVP SRTQPGHFFA LPQSPQLFKQ LLMVAGLDRY YQITKCFRDE DLRADRQPEF TQIDIEASFV DEEAVMGTAE PMIRGLFAEV LGVQLPDPFP RMTYRDAMHR FGVDRPDLRN PLELTELTDL MRAVDFKVFR EAAERPHGRV ACLRVPGGAQ LSRAQIDAYT QFTAIYGARG LAWIKVNALD QGNEGLQSPI VKFLPEMVLS EILRRSGAAA GDILFFGADT AKIVNEALGN LRNRVAADLG LLEGEWCPVW ITDFPMFDYD DKEDRWTSTH HPFTAPQTEH LETLGQDPGN ALARAYDLVL NGNEIGGGSI RIHQEAVQEK VFAALGIGAE EARDKFGFLL DALHYGAPPH GGLAFGLDRL VMLLCGAETI RDVIAFPKTQ KAGCLLTEAP GTVADKQLQE LGIRLRPGVG GGVPNP
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