Gene Lferr_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0050 
Symbol 
ID6875999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp54738 
End bp55751 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content58% 
IMG OID642787929 
Productputative sulfate-binding protein 
Protein accessionYP_002218519 
Protein GI198282198 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.113251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA GCAGCACACT ACGGCTGGCC CCACTGCTGG CAGCCGCCTC CCTGATGGTT 
TTTGGTACCT GCGCCGTGGC GGCGGACAAC GGCTGGGGTG CCCCGGGCGA GTTCCATGGC
ACGAAGAGTC AGGTATTTCC TCCCTGGCAA AATGGCGCCA ACAATCCAGC GACCTCCAAA
GGTCTGGATT TTACCATCCC AGAAGTCGAC AACCTGCCGG ATTTTCACGG TAGCATCGAC
AACCCGAAAC TGAGCATCTT CGTGGGGGGT AACTACTTTT TTGCCATGGC ACCGCTGGTG
GCCGCGTTTG AGAAGGAGCA CCCGGAGATC AAAGGCAGAA TCTATTACGA GACCATTCCG
CCGGGCTTGC TGATCCGGCA GATGGAGCAT GGCAATACCA TCACGGTGGG GAACATGACC
TGGACGGTCA AGCCCGACGT ATACGCCGCC GGGTTGCAGA AAGTGGACTA TTACGTTCAG
CACGGTCTGC TAAAGGGGCC GGCGGTGCCT TATGTCACCA ACGACCTCAC CATCATGGTT
CCCAAGGGCA ACCCGGCCCA CATCAGCGGA CTCCAGGATC TGGGCAAACC CGGAATGCGG
CTGGTCATGC CCAATCCCGC ATGGGAGGGC ATCGCCCGGC AAATCAAGAT GAGCCTCACG
AAGGCGGGTG GACCGGCACT GGCCACCGCG GTGTATGACA CCAAGGTAAA GAACGGCGAA
ACCATTCTGA CGGAAATTCA CCACCGCCAG AGTCCCATGT TCCTGATGCA GGGAAGGGCC
GTTGCCGGAG TAACCTGGAA ATCCGAAGCC ATCTTCCAGG AAAAGATCGG CAATCCCATC
GGCAACGTCG CGATTCCGGC CCAATTCAAT ACCAAGGCCA TCTATGCGGC TGCTGCAGTC
AAGGATGCGC CTCACCCCAA ATGGGCAGAG GCGTGGGTAA ACTTCCTCAA GTCGCCAACG
GCCCTGCACA TCTTCGAAGA GTATGGCTTT CAGCCGTATA CCCAGGGGAA GTGA
 
Protein sequence
MTKSSTLRLA PLLAAASLMV FGTCAVAADN GWGAPGEFHG TKSQVFPPWQ NGANNPATSK 
GLDFTIPEVD NLPDFHGSID NPKLSIFVGG NYFFAMAPLV AAFEKEHPEI KGRIYYETIP
PGLLIRQMEH GNTITVGNMT WTVKPDVYAA GLQKVDYYVQ HGLLKGPAVP YVTNDLTIMV
PKGNPAHISG LQDLGKPGMR LVMPNPAWEG IARQIKMSLT KAGGPALATA VYDTKVKNGE
TILTEIHHRQ SPMFLMQGRA VAGVTWKSEA IFQEKIGNPI GNVAIPAQFN TKAIYAAAAV
KDAPHPKWAE AWVNFLKSPT ALHIFEEYGF QPYTQGK