Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0048 |
Symbol | |
ID | 6875997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 53012 |
End bp | 53530 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642787927 |
Product | Redoxin domain protein |
Protein accession | YP_002218517 |
Protein GI | 198282196 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0534182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAAAAA CGGTTTGGCC TATGGCCAAA GTGGCCATCA TCGCGATGAT CGGCGCATTC CTGCTGTGGA TCAGCCTTAT CAAGCCCATG CTTCATAAGT CCGATGTGGC AACGGCAACC ATTCCGCTGG TGAATGGCAA AACCTTGGAT GTAACGGCGC TGCGCGGCAA GGTCGTGGTA TTGAATTTCT GGTCTCCCGA TTGCCCGCCC TGTATCCAGG AACTGCCCGA TCTGGAACGA CTTTATCAGA CCTACCGCGC GCAGGGTCTG GTGGTGGTAG GCATCGCCAC GCCGGGATCG TCCAGGTCCA GAAGCCTCGC CGCCGCAGCC ATGGCCCACG TGACTTATCC TTTATCTGTG GATCAAAATG GCACCCTCAC CCGTGCAGTG GGCGGAATCA TGGTTACACC CACACAGGTA ATCATCGACA GGGAAGGGCG GGTGATCGAC AAATACCAGG GCGTCGTTTC CGGGGAGGAG CCGATGGACG AGATTCTGCG GGCATTACAG CAGAAGTGA
|
Protein sequence | MSKTVWPMAK VAIIAMIGAF LLWISLIKPM LHKSDVATAT IPLVNGKTLD VTALRGKVVV LNFWSPDCPP CIQELPDLER LYQTYRAQGL VVVGIATPGS SRSRSLAAAA MAHVTYPLSV DQNGTLTRAV GGIMVTPTQV IIDREGRVID KYQGVVSGEE PMDEILRALQ QK
|
| |