Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0047 |
Symbol | |
ID | 6875996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 52580 |
End bp | 52981 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642787926 |
Product | Rhodanese domain protein |
Protein accession | YP_002218516 |
Protein GI | 198282195 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.045632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCACC TAATCAAAGA AGCAACCTGT CAGCAGGCGC TTGCGGCGCT GGGCGATCGC GATTCCGTCG TCATTGACGT GCGATGCCAG GAGGAATATG CGTTATACGG GCAAATCGCG GGGGCGCACC TCATCCCGTG GAAGCTGATT CGTGATGACG CACTGGTGGA TAATCAGCAT TTTCACCGCG AAGTGAAAAA CGCCGTGAGC AACTGCAAGG GGGGCTTGGG CGGTTTCAAG CTATACTTCA TCTGCGGTAG CGGAAACCGT TCCTGTGATG CTGCGGAATG CGCCCTGGAC ATGCTGGGAG ACGATGGTTA CGAGGTTTAT AACGTCGTCG GCGGTATAGA TGAGTGGGTC TGCAGTGGCC TGCCGACATC GCCTGCTGCC CTCTCGGCGT AG
|
Protein sequence | MSHLIKEATC QQALAALGDR DSVVIDVRCQ EEYALYGQIA GAHLIPWKLI RDDALVDNQH FHREVKNAVS NCKGGLGGFK LYFICGSGNR SCDAAECALD MLGDDGYEVY NVVGGIDEWV CSGLPTSPAA LSA
|
| |