Gene Lferr_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0047 
Symbol 
ID6875996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp52580 
End bp52981 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content57% 
IMG OID642787926 
ProductRhodanese domain protein 
Protein accessionYP_002218516 
Protein GI198282195 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.045632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACC TAATCAAAGA AGCAACCTGT CAGCAGGCGC TTGCGGCGCT GGGCGATCGC 
GATTCCGTCG TCATTGACGT GCGATGCCAG GAGGAATATG CGTTATACGG GCAAATCGCG
GGGGCGCACC TCATCCCGTG GAAGCTGATT CGTGATGACG CACTGGTGGA TAATCAGCAT
TTTCACCGCG AAGTGAAAAA CGCCGTGAGC AACTGCAAGG GGGGCTTGGG CGGTTTCAAG
CTATACTTCA TCTGCGGTAG CGGAAACCGT TCCTGTGATG CTGCGGAATG CGCCCTGGAC
ATGCTGGGAG ACGATGGTTA CGAGGTTTAT AACGTCGTCG GCGGTATAGA TGAGTGGGTC
TGCAGTGGCC TGCCGACATC GCCTGCTGCC CTCTCGGCGT AG
 
Protein sequence
MSHLIKEATC QQALAALGDR DSVVIDVRCQ EEYALYGQIA GAHLIPWKLI RDDALVDNQH 
FHREVKNAVS NCKGGLGGFK LYFICGSGNR SCDAAECALD MLGDDGYEVY NVVGGIDEWV
CSGLPTSPAA LSA