Gene Lferr_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0046 
Symbol 
ID6875995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp51872 
End bp52519 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content55% 
IMG OID642787925 
ProductRhodanese domain protein 
Protein accessionYP_002218515 
Protein GI198282194 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.100616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC GCCTAGCAAA CGCCGCAATT CCATTTGCCT TGGTCGGTAT GTTATTCGGG 
CTGTCGGTAT CGGTGGCCTC CGCCGACGAC AGTGGTAACC AAGCCGCACA ACAAGTGTTG
AATGCACGCA TGGAGAAATT CTTTGCGGAT CAGAAACCCT TTCCCTACGG CACCTATCAG
TATACGGACC GCAGCTTGTT ATTGGCGATC AGCAAGGATC CCAGCAAATA TGCGTTGATC
GATATCCGGA CGCCAACCTA TCACGATTTT TTCTGCGGAG TGCATTCCAA CAAGCATGTC
TGCACCGGAC GGGGCTGGCA ACGTATTTAC GGCTATGCAC AGGGCCATGT GCCAGGTGCT
CAGAATATCC CGTATCTGAA CCTTCCTGCG GCCATCAAGA GCGACAGCAT TCCCAAAAAC
AAGACCGTTA TCCTCATGTG TCCGACAGGC CAGCTATCCA ACCAGACGGC CGGAGTATTG
CGCATGCTCG GTTATGACGC CTACGCCTTG CGTGGCGGGG TCAATGGCTG GAAAAAAGCA
GGGTACCCCA TTGTCATCGG TAAAGAGCCG GGCACCATGG CGCAGGCGTG TCATCCCTGG
CAGACGTGCT GGCGGCAGTT CCAGTATGAC AACCCGCAGG CGCATTGA
 
Protein sequence
MFKRLANAAI PFALVGMLFG LSVSVASADD SGNQAAQQVL NARMEKFFAD QKPFPYGTYQ 
YTDRSLLLAI SKDPSKYALI DIRTPTYHDF FCGVHSNKHV CTGRGWQRIY GYAQGHVPGA
QNIPYLNLPA AIKSDSIPKN KTVILMCPTG QLSNQTAGVL RMLGYDAYAL RGGVNGWKKA
GYPIVIGKEP GTMAQACHPW QTCWRQFQYD NPQAH