Gene Lferr_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0041 
Symbol 
ID6875990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp45417 
End bp47072 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content64% 
IMG OID642787920 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002218510 
Protein GI198282189 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGTA TCTTCGCCGC TCCGGGTATC TGCTTGGCCG TTCGCCCTGT TTCTCCAGAC 
GCCGTCGCTG ACCCCACATT TACCAGGGTA GATAGCGTGC TGCTGTTGCT GGGCCTGAGC
AGCGGCCTGC TGCTGGCTTC GTGGAGCCTC GCCTGGTCCA TCCCGATGCT GCCGTACATC
GCTGGCGCCT ACAGCACCAG CCTCGACCAC GCGATCTGGT CGCTGACTTT TTACCTGCTG
GCCTGGGCGC TCGCGGTGGT ACCCGCGACC TGGCTCTACC AGCGTTTCGG TGAACTGCGG
ATGTTTCAGA TCTCCCTCAC CCTGCTGATG GTGGCCACCC TGCCCGATGT CTTCAGCGAC
CATTTCGGCT TATTTTTGGG CGGCAGGTTT GTGCAGGGCA TGGCGGCGGG TTTTCTGACG
CCCCTGACCC GGCGACTGCT GATCCGCTAT GCGCCGTTGC GCTGGCAAAA GACGGCTGCC
GATCTCAGCA TCGTCAATCT GGTGCTGCCC TTGCTTGCCG GGCCCTCGCT GGCGGGCTGG
ATCGCCTATA CCTGGGACTG GCGGGCCGCG GCGGTGTTGA CCTTTCCCGT GGGTTTACTG
GCGCTGGGCA TGGTCTCCGC CCTGTTGCGC GACAATCCCG AGGAACACCT GCGCCAACCC
TTCGACTGGA TCGGGCTGGT GCTGCTCGCC GCATGGAGCG CCACCTTCCA GATCGTGCTC
AACCGCGGCG AGGACTGGAA CTGGTGGGAT GCCCCCGCCA TCCGCTGGCT GACCGCGCTG
GGCGCCGTGC TCCTCGTGGC CTTCTTCCTC TGGGAAAGGG ATCAACCGCA CCCCTGCCTG
GACCTCCGCC TCCTGCGGCG ACGGAATTAC GTGCTGGCGC TGCCGGCGCT GGTTTTCGGG
TGGGGACTGC TGCTGGGCGG GAACAGTCTT TTTGTCTCGG CCCTCATCAG TCATGCCAAC
TATTCCGCTT TCTGGGCGGG CGTGGTGTTG CTGCCCATGG CCCTCGGCGG CGTGCCACTG
ATCGCGGTGA TGGGACCCAT CTCGCACCGG GTGAATCCGC GCTGGCTGGC AACCATCTGC
TTTGGATTCG TCGCCATTTA TGGATTCACC ACTCGGCTCA ACCTGCACAG CAATCTGCGC
AGCCTGCTTC TCAGCCATTT GATCGAAGGC GTCGCCATCG GGTTTTATCT GGTACCCCTG
AGCTTGATCA TGTTTTCACG GCTGCCCCAG AGCCGCCTGC CCGCGGCGGC CACCTTGCAG
AACTTCGTGC GGATTCTCGG CGGCGCTTAT CTGTCCAGCG CTTTCTCGGC GCTGTGGATG
CGTCATGGCG ACACCTTCAG GGCGCATCTG ACCTGGCAAT CCCCCACTTT GCCCCTGCAA
AGCATGCTGG AGCACTGGCC CGTAAGGGGC TCCGCAGCGC GGGCCCTGTC CATCCAGCAC
CTGACCACCC AGAGTGCCGC ACTATCCATG CAATCCATGC TCTGGCTCTG GGGCTGGATG
GCGCTGGTTG TGCTTGCCCT CGTATGGCTC ACCAAAGGGC CATATCGCCG CAGGGCAGGG
CAGGTTCGGC GGGTCACCAT CGAGCAGCAG ATCATGGAAA GCGCCGGTTT TGACGCGGAG
CCGAGTCGGC GGGAGGATGT GGAACGTGCA CCGTAA
 
Protein sequence
MHRIFAAPGI CLAVRPVSPD AVADPTFTRV DSVLLLLGLS SGLLLASWSL AWSIPMLPYI 
AGAYSTSLDH AIWSLTFYLL AWALAVVPAT WLYQRFGELR MFQISLTLLM VATLPDVFSD
HFGLFLGGRF VQGMAAGFLT PLTRRLLIRY APLRWQKTAA DLSIVNLVLP LLAGPSLAGW
IAYTWDWRAA AVLTFPVGLL ALGMVSALLR DNPEEHLRQP FDWIGLVLLA AWSATFQIVL
NRGEDWNWWD APAIRWLTAL GAVLLVAFFL WERDQPHPCL DLRLLRRRNY VLALPALVFG
WGLLLGGNSL FVSALISHAN YSAFWAGVVL LPMALGGVPL IAVMGPISHR VNPRWLATIC
FGFVAIYGFT TRLNLHSNLR SLLLSHLIEG VAIGFYLVPL SLIMFSRLPQ SRLPAAATLQ
NFVRILGGAY LSSAFSALWM RHGDTFRAHL TWQSPTLPLQ SMLEHWPVRG SAARALSIQH
LTTQSAALSM QSMLWLWGWM ALVVLALVWL TKGPYRRRAG QVRRVTIEQQ IMESAGFDAE
PSRREDVERA P