| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0039 |
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| Symbol | |
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| ID | 6875988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 42895 |
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| End bp | 44007 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642787918 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002218508 |
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| Protein GI | 198282187 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGTC CCGACAGCAC CCCTGACAAC GCGAGCAAGG CCGGGGCGGA CCAGAGGCGG
CGCAACCTCT GGATACTGGC CGCCGTCGTC CTGCTCGGTC TGCTGGTCTA CGGCCTCTGG
TGGCTGCTGA TCGGACAAAG GCGACTGGAG GTAGACGATG CCTATGTCGA GGGCAACCTT
TACGCGGTGG ATGCGCGCAC GACCGGAACC GTCGCCGCGA TCCCCGCCTA CGACACCATG
CGGGTGGAGG CAGGCTCCCC TCTGGTGATA CTCCGCGGCG AACGTGCCGG TCGCAAGCTG
CAACAGGCGG AAGCACAACT GGCGCAGGCC CGGCAAAATG CGCTGGCGCT GGTCCACGAA
ATTCAGGCCA GTCGCAGCAA GGAGGCCGCC CTGCGGGCCA GCCTGAACAG TGCGCAGCAG
AAAGCCTGGC GCCTACGGGC GTCGGCCAGC GCCGGTGCGA GCGAGGATAT GGACGCCATC
ACGGCGGCCG ACGCGGTGCG GCGCCTGCAA GCCGAAATCG GCGCCGAATC GGCGCATAGC
GCCGCCCTCA TCGCGCAGCT CGGGGCCGCC GGTCCGGCGG GCAATCCCGC CGTACGTGCG
GCGACGCAGG CCCTGGCCCT GGCCCGCCTG AACTGGACAC GACGCATCAT CCGCGCCCCG
GTCACCGGTA TCGTCGCGCA GCAGGCGGTG CAGCCCGGAC AGTGGGTGAG CGCGGGCCAG
CGCCTGTTCA CGGTGGTGCC ATTGCAGCAG ATATGGGTCA CTGCCAACAT CAAGGAAACC
CGTCTGGCGG GAGTGCGCCC CGGCGCGGCG GTGACACTGC ATTCTGATCT TTATGGTAAC
GGCGTTACCT ATCACGGCTG GGTGGTGGGA CTGGGAGGGG GCTCCGGCGC CGTCTTCGCG
GTGCTGCCGC CGGAGAATGC CAGCGGCAAC TGGATCAAGT TCACCCAGCG GGTACCGGTG
CGCATCGCCG TCGATCCGAA GGACTTGACC CGGCACCCGC TGCGTCCCGG TCTGACCATG
ACGGCCCGGA TCGCGCTGCA TGGCCCGTGG ATACGGCGGC CGGTACCGGA CTGGTTCCTG
CGTTCCGCAG CCGCTTCGCG CCCGGCTCCC TGA
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| Protein sequence | MISPDSTPDN ASKAGADQRR RNLWILAAVV LLGLLVYGLW WLLIGQRRLE VDDAYVEGNL
YAVDARTTGT VAAIPAYDTM RVEAGSPLVI LRGERAGRKL QQAEAQLAQA RQNALALVHE
IQASRSKEAA LRASLNSAQQ KAWRLRASAS AGASEDMDAI TAADAVRRLQ AEIGAESAHS
AALIAQLGAA GPAGNPAVRA ATQALALARL NWTRRIIRAP VTGIVAQQAV QPGQWVSAGQ
RLFTVVPLQQ IWVTANIKET RLAGVRPGAA VTLHSDLYGN GVTYHGWVVG LGGGSGAVFA
VLPPENASGN WIKFTQRVPV RIAVDPKDLT RHPLRPGLTM TARIALHGPW IRRPVPDWFL
RSAAASRPAP
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