| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0019 |
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| Symbol | |
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| ID | 6875968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 21528 |
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| End bp | 22577 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642787898 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_002218488 |
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| Protein GI | 198282167 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.154254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGA ACATCTGGCG CAACACCCTA TTTTGTCTCG GCCTCTGCGC CATGGCCCCG
GTAATGGCGC AGGCGGCGCC GTCCGGCACA CTGTTGCGCA CTGCGCACAG CTACACCGTC
AAACGTGGAG ATACCCTCTG GGGTATTGCC GCACATTTTC TCAAAAACCC TTGGGAATGG
CCGCGGCTAT GGCACCGGAA TACCTACATC AAAAACCCCA ACCTGATCTA TCCGGGCGAC
CGCGTCGTGA TCACCCGCGG GCCGGGCGGC CAGCCGGAAC TCCGTGTGAT CGCGCTGCAT
CCTCAAATGA CCGCGGAGCC CCTGCCCACG GTCGCACGCG GCGAGGTCAT GCCTTTTCTC
GGCAACCCCG GTGTCATCGC CAGCAAGAAG GCTTACGACC AACTGCCTTA TCTTGCCGCC
AGCGCCAGTG AGCATATCGT CTACGCGGTC GGCGACAAAC TCTATGCCTC CGGTCTGGCA
CATGCGCCCG TTGGTGCCCA TTACCAGATT GTCGCCCTCG GGCCGGAGCT CTATCGTCCC
GGCCGCAAAA ATGCCGTCGG TTATGCACTC CGCGATCTGG GCAGCGCCGT CGTGCGTCGC
AATGGCGCCC ACGCCGCCAT GGAAATCACC AACGCCCTGA AGGAAATCTC GCTGGGCGAC
CGGCTGATAC CCGCCACGAA GAGCGTTGTA CCCCACTACT TCCCCAGCGC CCCCTCCCAC
CCGGTGAAGG CTCACATCAT CGCCAAGATG AGTGATTATC CCGAAATCAT GGTGGGTCAG
GTGGTTATCG TGGACCAGGG CCGGGAAGAC GGTCTACGCG ACGGCAACGT ACTACAGATT
GAAAGAGCCG CGGAAACGAC GAAAAATGCC GTGACCGGCA AAACCTTCGC CCTGCCACCC
CAGAAGGTGG GCAGTGTGAT GCTGTTCCGG GTCTTTCCCA CCGTCTCCTA CGCGGTGATT
ACCACGGCGA CGCGTGGCAT CCAGGTAGGT GACCATCTGG CCAGTCCGAG TCCCGTAACG
GCCAGCGACA GCTCCGCAGG GAACGGGTGA
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| Protein sequence | MQKNIWRNTL FCLGLCAMAP VMAQAAPSGT LLRTAHSYTV KRGDTLWGIA AHFLKNPWEW
PRLWHRNTYI KNPNLIYPGD RVVITRGPGG QPELRVIALH PQMTAEPLPT VARGEVMPFL
GNPGVIASKK AYDQLPYLAA SASEHIVYAV GDKLYASGLA HAPVGAHYQI VALGPELYRP
GRKNAVGYAL RDLGSAVVRR NGAHAAMEIT NALKEISLGD RLIPATKSVV PHYFPSAPSH
PVKAHIIAKM SDYPEIMVGQ VVIVDQGRED GLRDGNVLQI ERAAETTKNA VTGKTFALPP
QKVGSVMLFR VFPTVSYAVI TTATRGIQVG DHLASPSPVT ASDSSAGNG
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