Gene Lferr_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0017 
Symbol 
ID6875966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp19984 
End bp20424 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID642787896 
Productprotein of unknown function DUF494 
Protein accessionYP_002218486 
Protein GI198282165 
COG category[S] Function unknown 
COG ID[COG2922] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.640555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0565587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACG TCATAGATAT CATCAGTTAT TTGCTCGACC ATCTCGACGA AGACGACAAC 
GACGACATGG TTGAAGAGCA TTTGCGTGCT GTCGGTTTTG CCGACGGCGA TATTCAGCGT
GCCCTCGACT GGATGGAAGG CTTTGCGGTA GAGGAGCAAG AGGCGACCAG CCCCCGCTCT
CTGCGCGCCT ACCATCCCTA CGAACAGCAA AGTCTTTCGG TGGCCGCCCG CGGGCAGTTA
CACGACTGGG AGCGGCTTGG TGTCATCAAC GGCGCCATGC GTGAACGCAT TATCGATCGC
CTGCTCGCCC TGGAACTGGA CGACACCGAT CTCGAAACCC TCGACTGGGT GACCTTCATG
GTGATGGCCA ACGACCCCGG TCCCGAGGCC TTCTGGGTCG ATGCCCTGCT GGGCAATGAC
GGCGCACGGA TTCTCCACTG A
 
Protein sequence
MEDVIDIISY LLDHLDEDDN DDMVEEHLRA VGFADGDIQR ALDWMEGFAV EEQEATSPRS 
LRAYHPYEQQ SLSVAARGQL HDWERLGVIN GAMRERIIDR LLALELDDTD LETLDWVTFM
VMANDPGPEA FWVDALLGND GARILH