| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0007 |
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| Symbol | |
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| ID | 6875956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 10719 |
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| End bp | 11462 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642787886 |
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| Product | chaperone protein EcpD |
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| Protein accession | YP_002218476 |
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| Protein GI | 198282155 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0410847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00437464 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGAGCG GTGCTGCAAA TATCCGGCGC CTTATTGTCG GCGTCACGAG TATATTTATT
ATCTCGTTTG CCGTCGGCAT AGCCAGCGCA GTATCCCTGA CCGTGCTGCC GGTCATCATT
CAGATGGCGC CCGGGCAGAA GGCAACGACG TTGACGGTCA TCAACCACGG TAACCGCGAG
ATCGCCTTTC AGGTTCGCAC CTTCGCCTGG ACACAAGTGT CTGGCCACAA CAAATTGACG
CCCACCGCCG AATTGCTGGC CAGTCCACCC CTTGGCACCC TTGCGCCAGG TGGTCGCCAG
ATTATTCGCA TGGTGTTGCG CCGACCCCCA CAGGGAAGGG AGGCCAGTTA CCGAATCCTG
CTGGATGAAA TCCCGCCGCC AGCGGCGCCC GGGATGGTCC GGATCGCACT GCGTATGTCG
ATCCCGATCT TTGCCGAGCC CCAGACTCGG GTTGCGCCCC ATGTGCTATG GCAGGTGGAA
AGACGCAACG GACAGACTTT TCTGGTCGGT ATTAATGACG GTACACGCCA CGAGACTCTC
CGCGACATCA AACTCCAGGC CCCTGGCGGG GGCACGCTGA AAGTCGAGTC CAATATCAAC
CCTTATATCT TGGCGGGGGC CACAATGCGC TGGCACATCG TCACACCGTC CTCTCCACTG
GCCCCTGGCG CAGTCCTGCA ACTAACGGCA CGCACCAATA CCGGGCATAT TGACCAGTCG
GTCCGGGTTG TTGGCAGTCC ATGA
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| Protein sequence | MWSGAANIRR LIVGVTSIFI ISFAVGIASA VSLTVLPVII QMAPGQKATT LTVINHGNRE
IAFQVRTFAW TQVSGHNKLT PTAELLASPP LGTLAPGGRQ IIRMVLRRPP QGREASYRIL
LDEIPPPAAP GMVRIALRMS IPIFAEPQTR VAPHVLWQVE RRNGQTFLVG INDGTRHETL
RDIKLQAPGG GTLKVESNIN PYILAGATMR WHIVTPSSPL APGAVLQLTA RTNTGHIDQS
VRVVGSP
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