| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0004 |
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| Symbol | |
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| ID | 6875953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 4042 |
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| End bp | 6447 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642787883 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_002218473 |
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| Protein GI | 198282152 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0231697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000608059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATGATGG AAACATACGA TTCTTCCAGT ATCCAGGTGT TGAAAGGTCT GGAAGCGGTA
CGCAAACGCC CCGGCATGTA TATCGGCGAT ACCGATGACG GCAGCGGACT GCATCACATG
GTCTTCGAAG TAGTGGATAA CGCCATCGAT GAGGCGCTCG GCGGGTATTG CGATACCATC
ATCGTGACCA TCCACGAGGA TGAATCCGTC AGCATCAGCG ACAACGGTCG TGGTATACCG
GTGGACATGC ACGCCGGGGA GGGCCGATCC GCTGCCGAAG TCATCATGAC CGTGCTGCAT
GCAGGTGGTA AGTTCGATGA CAACGCCTAC AAGGTTTCCG GCGGCTTGCA CGGGGTTGGT
GTCTCGGTGG TCAACGCCCT TTCGGAAACT CTGCAATTGC GCATCTTCCG TGACGGTTAT
GTCTGGACCC AGGAGTATCA CGATGGCGAA CCCCAGGCAC CCATCGCCCG CGGCGATGCA
TCACGCAAAC ATGGCAGTAC CATCCGCTTC AAACCCTCGC CCCAGGTTTT TGCCGATACC
CATTTTCACT TCGAGATCAT CGCGAAGCGC TTGCGCGAAC TGGCCTTTCT CAATTCCGGC
GTGCATATCA CCCTGCTGGA TGAGCGGGCC AGCCGGGAGG AAACCTTTCA TTATGAAGGC
GGTATTCGCG CTTTCGTAGA GCATCTCAAC CGCAGCAAAA CCGCCATTCA TCCCAGTGTG
ATCACTCTCA CCGGCGAGCG CGACGGCATT GTCGTCGAAG CGGCCCTGCA GTGGAACGAA
GGCTATAACG AGGCGGTGCT CTGCTTCACC AACAATATTC CCCAGGCCGA TGGCGGCACC
CATTTGGCGG GCTTTCGCGG TGCCCTGACC CGTACCTTGA ACCAGTATAT GGAACGGGAA
GGCATCATCG CCAAGGCCAA GGTTGCGGTG AGTGGCGAGG ATGCACGCGA AGGATTGACA
GCGGTGCTTT CCGTCAAGGT ACCGGACCCC AAATTTTCTT CGCAGACCAA GGAAAAACTG
GTCTCCAGCG AGGTCAAACC GATAGTCGAG TCCTCCATGT CCGAGGCGCT GACCATGTTT
CTGGATGAGC ATCCCAAAGA GGCGCAGGCC ATCGCCGCCA AGATCGTCGA AGCGGCGCGG
GCGCGGGAAG CCGCCCGGCG GGCACGGGAA CTGACCCGCC GCAAGGGGGC GCTGGACATT
GCCAACCTTC CCGGCAAGCT GGCCGACTGT CAGGAGAAAG ATCCGGCCCA GTGTGAAATC
TATCTGGTGG AGGGCGATTC CGCAGGCGGC TCTGCCAAAC AGGGCCGGGA TCGCCGGCAT
CAGGCCATCC TTCCCCTGAA GGGCAAAATC CTCAATGTGG AACGGGCGCG TTTCGACCGG
ATGCTTTCGT CCGACGAAAT TGGCACCCTG ATTACCGCGC TGGGTACCGG TATCGGTGCC
GGGGATTTTG ATGTGGCTAA GCTGCGTTAT CACCGGGTCA TCATCATGAC GGACGCGGAC
GTGGACGGCA GCCACATCCG CACCCTGTTG CTGACCTTTT TCTATCGGCA GATGCCCGAT
CTCGTGGCAC GCGGCCATAT TTACATCGCC CAGCCGCCCC TCTACAAGGT CAAGAAGGGC
AAGGAGGAAC GCTACCTCAA GGATGACGGC GAACTGGCCG CCTATCTGCG TGAAATTGCC
ATGCAGGGCG CGCAATTCCG TCCCGCGGCG GATGCCGAGC CGGTAACGGA TGAGCAACTG
GGCGGCATGA TGCGTCAATA CCAGAACATC GAGGCACTGG TGCAGCGTCT GGAACGGCGT
TATCCCAGTA CTCTGCTCTG GGCCTTGGCC ACCTTGCCAC CCATCGTTGC GGAGTCGGCG
GATAGCGCCA CCTGGGACGA TTTTGCGCGG CAGCTCCGCG CGGCACTGGA AGTGAATGCC
CTGCCCGCCG AACATTACAC GGTGGAGCGG GTGGGTGAAG CGGAGGCCTT GCGCCTGGTG
GTGCGCCGCG AACATCATGG CAGCGTGGAA CTGCGTTTCT TCGATCAGGA TTTTTTTGCC
GGGGGCGAAT ATCGACATCT GGCGGATTAT GCGCGGCAGA TCGAGGGCAA AATCGGCGTG
GGAGCGCGTA TGGAAAGGGG CGAACGAGGG CTTGCCGTCA GCCGTTTCCG CACCGCCATG
GACTGGCTTC TGGCGGATGC CCGCCGTGGC GTCGAGATTC AGCGCTACAA GGGACTCGGT
GAAATGAATC CGGAACAGCT CTGGGAAACC ACCATGAATG CCGCAAACCG CCGTCTGGTG
CGGGTGGATG TGGAAGACGC CATCGCCGCC GACGAGGTCT TTTCCATGCT CATGGGCGAC
GCGGTGGAAC CGCGTCGGCG CTTTATCGAG GAGAATGCGC GTTTTGTATC CAGACTCGAT
ATCTGA
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| Protein sequence | MMMETYDSSS IQVLKGLEAV RKRPGMYIGD TDDGSGLHHM VFEVVDNAID EALGGYCDTI
IVTIHEDESV SISDNGRGIP VDMHAGEGRS AAEVIMTVLH AGGKFDDNAY KVSGGLHGVG
VSVVNALSET LQLRIFRDGY VWTQEYHDGE PQAPIARGDA SRKHGSTIRF KPSPQVFADT
HFHFEIIAKR LRELAFLNSG VHITLLDERA SREETFHYEG GIRAFVEHLN RSKTAIHPSV
ITLTGERDGI VVEAALQWNE GYNEAVLCFT NNIPQADGGT HLAGFRGALT RTLNQYMERE
GIIAKAKVAV SGEDAREGLT AVLSVKVPDP KFSSQTKEKL VSSEVKPIVE SSMSEALTMF
LDEHPKEAQA IAAKIVEAAR AREAARRARE LTRRKGALDI ANLPGKLADC QEKDPAQCEI
YLVEGDSAGG SAKQGRDRRH QAILPLKGKI LNVERARFDR MLSSDEIGTL ITALGTGIGA
GDFDVAKLRY HRVIIMTDAD VDGSHIRTLL LTFFYRQMPD LVARGHIYIA QPPLYKVKKG
KEERYLKDDG ELAAYLREIA MQGAQFRPAA DAEPVTDEQL GGMMRQYQNI EALVQRLERR
YPSTLLWALA TLPPIVAESA DSATWDDFAR QLRAALEVNA LPAEHYTVER VGEAEALRLV
VRREHHGSVE LRFFDQDFFA GGEYRHLADY ARQIEGKIGV GARMERGERG LAVSRFRTAM
DWLLADARRG VEIQRYKGLG EMNPEQLWET TMNAANRRLV RVDVEDAIAA DEVFSMLMGD
AVEPRRRFIE ENARFVSRLD I
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