| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0002 |
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| Symbol | |
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| ID | 6875951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1894 |
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| End bp | 2991 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642787881 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_002218471 |
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| Protein GI | 198282150 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000318907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000394754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAATCA CCATAGATCG TGAAGATCTT CTCCCCATCC TGGCGAATAT GGCCAATATT
GCCGACCGGC GCCCGGTACA ACCAATTCTG GCCCATGTCC TTATCGAAGC CGCAGGCCAA
CACTGCCGCT TCGTCGCTAC CGATCTGGAA GTCCAGCTTT CCGCCGACCT GGATCACCCG
GTAGATGCGC CGGGCACCTG CGCCGTCCCC GCTCGCAAAC TCTATGACAT CTGTCGGGCG
TTACCCGAAC ACACCCCCAT AGAATTTCAT AAAGACGGCG AAAAGCTGCT CCTGAAGGCC
GCCAAGAGCC GCTTTACCCT GCACATATTA CCCGCCGATC AATTTCCGTA CCTCAGTACC
CACAGCAGCC TCTGTCAGGG TAACGGCAAT GCCAAAACCT TTCGCGAAGC GCTCGCCGTC
GTCGCCAACA CCATGGCACA GAACGACGCA AGGCTTTTTC TGAACGGCGT CCTCATCGAG
GTGGAAGGTC AGGAGCTGCG TCTCGTAGCC ACCGACGGTC ATCGTCTGGC CATGATGACC
CTGCCTTTTG CCAGCAGCCT GGAAAGCGGA AGCTACCAGG CCATACTGCC GCGCAAAGCC
GTCCTCGAAC TACTGCGGAT TCTCGATGAC GGCGACATCG TTCTGGAAAT GTCGGATGCC
AGCTTTCTGC TCAATGATGG TACACAGCAG TTCGCCTGCA AGCTCATCGA CGCCAAATAT
CCCGATTACC GCCGGGTCAT CCCCCAGGGA CACCCCCGCT TCGCCATACT GGACCGCCAG
GCCTTCAAAA GTGCCTTGCA GCAGAGCGAC GTTCTGGTCA GCGACCGTAA TCCGACCACC
CATCTTCATC TGGAAAACGA CCAGATGACC CTGCGCAGCC GCAATGAGGA GCAGGAGGAA
GGCGAAATCC AGATTCCCGT CGAGTATCAG GGTGACACCC TGGATATCGC TTTCAACAGC
CGCTATCTGA CGGACACGAC CCAGATATTC CCCCAGGAAA GTTTGCGGAT GCGGGTCAAG
GACAGCGACA GCAGCGCCGT TTTCACCCCG GTAGACAGCA ATAATCCCCT GTATATCATC
ATGCCCGTTC GTCTTTGA
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| Protein sequence | MKITIDREDL LPILANMANI ADRRPVQPIL AHVLIEAAGQ HCRFVATDLE VQLSADLDHP
VDAPGTCAVP ARKLYDICRA LPEHTPIEFH KDGEKLLLKA AKSRFTLHIL PADQFPYLST
HSSLCQGNGN AKTFREALAV VANTMAQNDA RLFLNGVLIE VEGQELRLVA TDGHRLAMMT
LPFASSLESG SYQAILPRKA VLELLRILDD GDIVLEMSDA SFLLNDGTQQ FACKLIDAKY
PDYRRVIPQG HPRFAILDRQ AFKSALQQSD VLVSDRNPTT HLHLENDQMT LRSRNEEQEE
GEIQIPVEYQ GDTLDIAFNS RYLTDTTQIF PQESLRMRVK DSDSSAVFTP VDSNNPLYII
MPVRL
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