| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0001 |
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| Symbol | |
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| ID | 6878909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 252 |
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| End bp | 1610 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642787880 |
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| Product | chromosomal replication initiator protein DnaA |
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| Protein accession | YP_002218470 |
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| Protein GI | 198282149 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000132407 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000453889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCAGTC ATCCAGCGCC ATCCGCGCTG CACAACGGAG ATGCCCTATG GGCAGCGCTG
TGCGTGCAGT TGCAAGAACA GACCACCGCC CAGCAGTTCA ACACCTGGCT GCGCCCCCTT
CGTGGCGAGC TGCATGGTAA CGAATTGCGC CTGTTCGCAC CCAATACCTT CGTCATGGAG
TGGGTACGGG AAAGGCTGAT AGACCTGCTG GAAGCGGTGC TTGCCGAGCT TGCGCCAGGG
ATGCTGCTGC GCCTGGAACT CAGCCCCGAA CAGGGGCTGG CGCCGGTCCC GGCGGGAACG
GCGACGCCGT CCGCCCCTTC CATCATCGAG CCGCGCAACG GCAACCGGCT CAATCCCGGA
TTCTCCTTTC AGTCCTATGT CGAGGGCAAA TCCAATCAAC TCGCGGTGGC GGCTGCCCGG
CAGGTCGCCC AAAATCCGGG GAAATCCTAC AACCCCCTGT ATATCTATGG CGGCGTCGGA
CTGGGCAAGA CCCATCTCAT GCAAGCGGTG GGCAACGCCA TCCTCCAGCG CAATGCCGAT
GCCAAGGTGC TCTATGTGAG CTCCGAAGGC TTCATCATGG ACATGGTGCG CTCCCTGCAA
CATAACACCA TCAACGACTT CAAGCAGCGC TACCGTAAGC TGGATGCCCT GCTCATCGAC
GACATCCAGT TTTTTGCGGG CAAGGATCGC ACCCAGGAGG AGTTTTTTCA CACCTTCAAC
GCCCTCTTTG ACGGCGGTCG GCAGATCATC ATCACCTGCG ACCGCTATCC CAAAGAGGTG
GACCGGCTGG AAGAGCGCCT GCAGTCGCGC TTCGGCTGGG GACTGACGGT CGCCATCCAG
CCCCACGATC TGGAAACCCG CATGGCCATC GTTCTTTGCA AGGCGGAAGA AAGCGGCGTC
GATTTGCCGG AGGAAGTGGC CTTCTTCATC GCCGAGAAAA TCCGCTCCCA TGTCCGCGAA
CTGGAAGGCG CGCTGCGCAG GGTCGTCGCC CACGTCAACT TCACCCACAA GCCCTACAAC
CTGGACACCG CCCGCGAGGC CCTGCGCGAC CTGATCGACG TGCAGAAACG CATGGTCAGC
CTCGACAACA TCCAGAAAGT CGTAGCCGAG TATTTTCACA TTCGCGGCTC GGATATGCAG
TCCAAGCGAC GCAGTCGCAA CATTGCCCGT CCCCGGCAGG TAGCCATGTG CCTCACCAAG
GAACTCACCA ACCACAGCCT TCCGGAAATC GGCGAGGCCT TCGGCGGACG CGACCACACC
ACCGTCCTCC ACGCCTGCCG CCAGATCGAA AAACTCCGCC TGGAAGAGAC CCAGATGGAC
GAAGATTACC GAAACCTGTT GCGGATTCTT GGCGCATGA
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| Protein sequence | MSSHPAPSAL HNGDALWAAL CVQLQEQTTA QQFNTWLRPL RGELHGNELR LFAPNTFVME
WVRERLIDLL EAVLAELAPG MLLRLELSPE QGLAPVPAGT ATPSAPSIIE PRNGNRLNPG
FSFQSYVEGK SNQLAVAAAR QVAQNPGKSY NPLYIYGGVG LGKTHLMQAV GNAILQRNAD
AKVLYVSSEG FIMDMVRSLQ HNTINDFKQR YRKLDALLID DIQFFAGKDR TQEEFFHTFN
ALFDGGRQII ITCDRYPKEV DRLEERLQSR FGWGLTVAIQ PHDLETRMAI VLCKAEESGV
DLPEEVAFFI AEKIRSHVRE LEGALRRVVA HVNFTHKPYN LDTAREALRD LIDVQKRMVS
LDNIQKVVAE YFHIRGSDMQ SKRRSRNIAR PRQVAMCLTK ELTNHSLPEI GEAFGGRDHT
TVLHACRQIE KLRLEETQMD EDYRNLLRIL GA
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