Gene SeD_A5009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A5009 
Symbol 
ID6872668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4839209 
End bp4839880 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content43% 
IMG OID642787876 
Productputative inner membrane protein 
Protein accessionYP_002218466 
Protein GI198242836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.177455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGT TAAACGGCGG GAATGTGTAT CGTCCCACAG GGAAAGAAAA AAACCTGCAA 
GCCATTTTAA ATATTCATCG GCACGTTATT CAAAACATCT CCCCTGTCAC TATTACGGCC 
GGTAAAACAC TGGATATCAA GATTGATAAT CAATCCCACA TCCTGTTAAT CACTAAAGGC 
GCTATTAAAG TATGTCGGCG TATCGACAGC ATTGTAATGG GCTGCGGTGT CTCACCAATG 
ATTTTAGGCC TTGTAGATGC CTATGCTGAC TTATACCAGT TAGAAGAGAA TTCAGACGTC 
TTTTTTATCG CCGAAACCAC CTGTGAATAT TATCCTGTCC CAGTAAAAGA TTTTGTGGAA 
ATAGCTGATG AAAAGCATCT CTGGCGTGAC ATTTCGAACA TCCTGATGTA CCGCATTGCT 
TTCATGACTA ACCGTGACAG AAATCTTATC GGGCAGGACG CCTATAGCCA GATAAAAGCG 
CTGTTACTTG AACTGTGGTC GTATCCTGAA AGCTCACGAT TTGAGATCAA TGCACAGAAC 
TTCATACAGC AGAGAACCGG GCTTTCACGC AGCCGTATCA TGCAGGTACT TTCAGAACTA 
AAAGCGGGGG ACTATATAAA AATACTGCAT GGAAGACTGT TAGAGCTTCG AAACCTGCCA 
GTTTCATTTT AA
 
Protein sequence
MKQLNGGNVY RPTGKEKNLQ AILNIHRHVI QNISPVTITA GKTLDIKIDN QSHILLITKG 
AIKVCRRIDS IVMGCGVSPM ILGLVDAYAD LYQLEENSDV FFIAETTCEY YPVPVKDFVE 
IADEKHLWRD ISNILMYRIA FMTNRDRNLI GQDAYSQIKA LLLELWSYPE SSRFEINAQN 
FIQQRTGLSR SRIMQVLSEL KAGDYIKILH GRLLELRNLP VSF