Gene SeD_A5001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A5001 
Symbol 
ID6871157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4830409 
End bp4831833 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content58% 
IMG OID642787870 
Productsensory histidine kinase CreC 
Protein accessionYP_002218460 
Protein GI198245862 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GAATGCGTTT GCTGCTGGGC TACTTTCTTA TTGTCGCCGT CGCCGCCGTG 
TTTGTGCTGT CTATCTTTGT TCAGGAGATA AAGCCGGGCG TCCGCCGCGC GACGGAAGGG
ACGCTGATTG ACACCGCAAC GCTGCTGGCG GCGCTGGCCC GCGACGATCT CCTTTCCGGC
AACCCGACTG ACGGCCAGCT GGCGAAGGCA TTCGCCCAAC TGCAACATCG CCCGTTTCGC
GCCAATATCA GCGGGATCGT CAAAGTGCGC AATGAATACC ATGTCTACAT GACGGATGCA
CAGGGGAAGG TGTTGTTTGA TTCGGAAAAC AAAGCGGTGG GGCAGGATTA TTCTCGCTGG
AATGACGTCT GGCTTACGCT GCGCGGACAG TATGGCGCCC GCAGCACGGC AAAAGATTCT
GCCGATCCCA ATAGCACCGT GATGTACGTA GCCGCGCCGA TAATCAGCGA TGGACGGATT
ATCGGCGTCC TGTCTGTCGG TAAACCGAAT GCGGCAATGG CGCCGGTGAT TAAGCGCAGC
GAACGGCGCA TTCTATGGGC CAGCGCCGTT TTACTGGGGA TTGCGCTGGC GATTGGCGCG
GGGATGGTCT GGTGGATTAA CCGCTCCATC GCCCGGTTGA CGCGCTATGC GGATTCCGTC
ACCGAAAACC GCCCACTTGC GTTACCTGCA TTAGGCAGCA GCGAGCTGCG TAAACTGGCG
CAGGCGCTGG AGAGTATGCG CATTAAGCTG GAAGGCAAGA ATGACATTGA GCAGTACGTG
TATGCGTTGA CTCATGAGCT GAAAAGTCCG CTGGCGGCGA TACGCGGCGC GGCGGAGATT
CTGCGTGAAG GACCGCCCGC GGATGTGGTT ACCCGCTTTA CAGAGAATAT ACTGGCGCAA
AATACGCGAA TGCAGGCGCT GGTAGCGACC CTGCTGCGCC AGGCGCGGCT GGAAAACCGG
CAGGATATCC CTCTCGCGCT GGTTGCTGTT GATGAACTAT TTACGCAGCT TAGCGAGGCG
CGCAGCATTC AGTTGGCGGC AAAAAATATC ACCCTTACTC TACGGCCTTC CTCGCTGGTT
GTCGTCGCCG ACGCGGAGCT TCTGGCGCAG GCGCTGGGCA ATGTGTTGGA CAATGCTATC
GACTTTACGC CTGAAAATGG CGTTATCACA TTAAGCGCTC AGCCGATGGG GGAGAAAGCG
ATCCTGCCGG TGACGGATTC CGGCTGTGGT ATTCCTGATT TTGCGCTGCC GCGCATTTTC
GACCGATTCT ATTCGTTGCC CCGTGAAAAC GGACGTAAAA GCAGCGGGCT TGGGCTGGCG
TTTGTCAGCG AGGCGGCGCG GCTCCTCAAC GGTGAGGTGA CGTTGTGCAA CCGTCCCGAA
GGCGGCGTGC TGGCCTCGTT GACACTTCAC CGTCACTTCA CATAA
 
Protein sequence
MRIGMRLLLG YFLIVAVAAV FVLSIFVQEI KPGVRRATEG TLIDTATLLA ALARDDLLSG 
NPTDGQLAKA FAQLQHRPFR ANISGIVKVR NEYHVYMTDA QGKVLFDSEN KAVGQDYSRW
NDVWLTLRGQ YGARSTAKDS ADPNSTVMYV AAPIISDGRI IGVLSVGKPN AAMAPVIKRS
ERRILWASAV LLGIALAIGA GMVWWINRSI ARLTRYADSV TENRPLALPA LGSSELRKLA
QALESMRIKL EGKNDIEQYV YALTHELKSP LAAIRGAAEI LREGPPADVV TRFTENILAQ
NTRMQALVAT LLRQARLENR QDIPLALVAV DELFTQLSEA RSIQLAAKNI TLTLRPSSLV
VVADAELLAQ ALGNVLDNAI DFTPENGVIT LSAQPMGEKA ILPVTDSGCG IPDFALPRIF
DRFYSLPREN GRKSSGLGLA FVSEAARLLN GEVTLCNRPE GGVLASLTLH RHFT