| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A5000 |
|---|
| Symbol | |
|---|
| ID | 6871786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 4829720 |
|---|
| End bp | 4830409 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642787869 |
|---|
| Product | DNA-binding response regulator CreB |
|---|
| Protein accession | YP_002218459 |
|---|
| Protein GI | 198241940 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 95 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAC CGCAGGTCTG GTTAGTCGAG GATGAAAAGG GAATCGCCGA TACGCTCATC
TACACCCTGC AACTGGAAGG GTTTACCGTT GAGCTATTCG CTCGCGGGCT GCCTGCGCTG
GAAAAAGCGC GTCAGCAACG GCCGGATGCG GTGATTCTCG ATGTGGGACT ACCGGATATC
AGCGGCTTTG AGCTGTGTCG GCAGTTGCTG GAACGCCATC CTGCGCTGCC GATTCTTTTC
CTGACTGCCC GTAGCGATGA AGTGGATCGA TTGCTTGGTC TGGAGATCGG CGCAGATGAT
TATGTCGCCA AGCCATTCTC GCCGCGCGAA GTGAGTGCCC GCGTGCGCAC GCTGCTGCGC
CGGGTGAAAA AGTTTGCTGC GCCGTCGCCG GTGGTGCGTA CCGGACATTT TGAACTCAAT
GAACCGGCGG CGCAGATCGC CTGGTTTGGT ACGCCGCTCT CGCTGACGCG TTATGAGTTT
CTGCTTCTTA AAACCCTGCT GCTGTCGCCG GAGCGCGTGT ACTCGCGTCA GCAATTGATG
GATATTGTCT GGTCTGATGC CCAGGAGACC TTCGATCGGA CGGTCGATAC ACACATCAAA
ACCCTGCGCG CTAAGCTACG CGCGATCAAC CCGGATCTCT CGCCAATTAA CACGCATCGT
GGAATGGGAT ACAGCCTGAG GAGCGTCTGA
|
|---|
| Protein sequence | MQQPQVWLVE DEKGIADTLI YTLQLEGFTV ELFARGLPAL EKARQQRPDA VILDVGLPDI
SGFELCRQLL ERHPALPILF LTARSDEVDR LLGLEIGADD YVAKPFSPRE VSARVRTLLR
RVKKFAAPSP VVRTGHFELN EPAAQIAWFG TPLSLTRYEF LLLKTLLLSP ERVYSRQQLM
DIVWSDAQET FDRTVDTHIK TLRAKLRAIN PDLSPINTHR GMGYSLRSV
|
|---|
| |