| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4993 |
|---|
| Symbol | |
|---|
| ID | 6875462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 4822646 |
|---|
| End bp | 4824313 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642787862 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_002218452 |
|---|
| Protein GI | 198244231 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 110 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCAAT TCGTTTATAC CATGCATCGT GTCGGCAAAG TGGTTCCGCC GAAACGTCAT
ATTCTGAAAA ACATCTCGCT GAGCTTCTTC CCTGGCGCCA AAATCGGCGT GCTGGGCCTT
AACGGCGCCG GTAAGTCTAC CCTGCTGCGC ATCATGGCGG GTCTCGATAA AGATATCGAG
GGCGAAGCGC GCCCGCAGCC CGGCATTAAG ATTGGCTACC TGCCGCAGGA ACCTCAGCTA
AACCCGGAAC ACACGGTACG CGAGTCGATT GAAGAGGCCG TTTCGGAAGT GGTTAACGCC
CTCAAACGTC TGGATGAAGT GTACGCGCTG TACGCCGATC CGGATGCCGA CTTCGACAAG
CTGGCCGCAG AGCAGGGCCG GCTTGAAGAG ATTATCCAGG CGCACGACGG TCATAATCTG
AACGTGCAGC TTGAGCGCGC AGCTGACGCT CTGCGTCTGC CGGACTGGGA TGCCAAAGTC
GAAAAACTGT CCGGCGGCGA GCGCCGTCGC GTGGCGCTGT GCCGTCTGTT GCTGGAAAAG
CCGGACATGC TGCTGCTCGA CGAACCCACC AACCACCTGG ATGCCGAATC TGTTGCGTGG
CTGGAACGTT TCCTGCACGA CTTCGAAGGT ACCGTCGTGG CGATTACCCA CGACCGTTAC
TTCCTCGATA ACGTCGCCGG CTGGATTCTG GAACTTGACC GCGGCGAAGG TATTCCGTGG
GAAGGCAACT ACTCCTCCTG GCTGGAGCAG AAAGATCAGC GTCTGGCGCA GGAAGCGTCT
GCCGAAGCGG CGCGCCGTAA ATCCATTGAG AAAGAGCTGG AGTGGGTGCG TCAGGGCGCG
AAAGGCCGTC AGTCGAAAGG TAAGGCGCGT CTGGCTCGCT TTGAAGAACT GAACAGCGTT
GAGTATCAGA AACGTAACGA AACCAACGAA CTGTTTATTC CACCAGGACC GCGTCTGGGC
GACAAAGTCA TTGAAGTCAG CAACCTGCGT AAATCCTACG GCGACCGCGT ACTGATCGAT
GACCTGAGCT TCTCGGTACC GAAAGGCGCT ATCGTCGGGA TCATCGGGCC AAACGGCGCG
GGTAAATCGA CCCTGTTCCG CATGATGTCC GGTCAGGAGC AGCCTGATAG CGGCACCATT
ACGCTGGGTG AAACCGTCAA GCTGGCCTCG GTCGATCAGT TCCGCGACGC GATGGACAAC
AGCAAAACCG TCTGGGAAGA AGTGTCCGGC GGGCTGGATA TCATGAAGAT CGGCAACACT
GAAATGCCAA GCCGCGCCTA TGTAGGCCGC TTCAACTTCA AAGGCGTCGA TCAGGGCAAA
CGCGTTGGCG AACTGTCCGG CGGTGAGCGC GGTCGTTTGC ATCTGGCGAA GCTGCTGCAG
GTGGGCGGTA ACGTCCTGCT GCTCGACGAA CCGACGAACG ACCTGGATAT CGAAACCCTG
CGCGCGCTGG AAAACGCCCT GCTGGAGTTC CCTGGCTGCG CGATGGTTAT CTCGCACGAC
CGTTGGTTCC TTGACCGTAT CGCCACCCAC ATTCTGGATT ATCAGGATGA AGGTAAGGTG
GAATTCTTCG AAGGCAACTT TACCGAATAC GAAGAGTACA AGAAACGCAC GCTGGGCGCC
GAGGCGCTGG AGCCGAAGCG TATCAAGTAC AAGCGTATTG CCAAATAA
|
|---|
| Protein sequence | MAQFVYTMHR VGKVVPPKRH ILKNISLSFF PGAKIGVLGL NGAGKSTLLR IMAGLDKDIE
GEARPQPGIK IGYLPQEPQL NPEHTVRESI EEAVSEVVNA LKRLDEVYAL YADPDADFDK
LAAEQGRLEE IIQAHDGHNL NVQLERAADA LRLPDWDAKV EKLSGGERRR VALCRLLLEK
PDMLLLDEPT NHLDAESVAW LERFLHDFEG TVVAITHDRY FLDNVAGWIL ELDRGEGIPW
EGNYSSWLEQ KDQRLAQEAS AEAARRKSIE KELEWVRQGA KGRQSKGKAR LARFEELNSV
EYQKRNETNE LFIPPGPRLG DKVIEVSNLR KSYGDRVLID DLSFSVPKGA IVGIIGPNGA
GKSTLFRMMS GQEQPDSGTI TLGETVKLAS VDQFRDAMDN SKTVWEEVSG GLDIMKIGNT
EMPSRAYVGR FNFKGVDQGK RVGELSGGER GRLHLAKLLQ VGGNVLLLDE PTNDLDIETL
RALENALLEF PGCAMVISHD RWFLDRIATH ILDYQDEGKV EFFEGNFTEY EEYKKRTLGA
EALEPKRIKY KRIAK
|
|---|
| |