Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4991 |
Symbol | radA |
ID | 6872344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4819763 |
End bp | 4821145 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642787860 |
Product | DNA repair protein RadA |
Protein accession | YP_002218450 |
Protein GI | 198242633 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 108 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAAAAG CTCCAAAACG CGCCTTTGTT TGTAATGAAT GTGGTGCCGA TTACCCACGC TGGCAGGGGC AGTGCAGCGC CTGCCAGGCC TGGAACACCA TTACTGAGGT GCGCCTTGCC GCGTCGCCGA CGGTGGCGCG TAACGAACGT CTGAGCGGAT ACGCCGGCAG TGCGGGCGTA TCAAAAGTGC AGAAACTGTC TGACATCAGT CTTGAGGAAC TGCCGCGCTT TTCTACCGGT TTTAAAGAGT TTGACCGCGT GCTGGGCGGC GGGGTGGTAC CCGGCAGCGC CATTTTGATT GGCGGTAATC CCGGCGCGGG CAAATCAACG TTGCTACTGC AAACGCTGTG CAAGCTCGCC GAGCAGATGA AAACGCTGTA CGTCACCGGC GAAGAGTCGC TACAGCAGGT GGCGATGCGC GCGCACCGTC TCGGCCTGCC GACCGCTAAT CTGAATATGC TGTCGGAAAC CAGCATCGAA CAAATTTGCC TGATTGCCGA AGAAGAACAG CCGAAACTGA TGGTGATCGA CTCCATACAG GTGATGCATA TGGCGGACAT CCAGTCGTCG CCGGGCAGTG TCGCCCAGGT CCGCGAAACG GCAGCCTACC TGACGCGCTT CGCCAAAACG CGCGGCGTGG CGATCGTGAT GGTCGGCCAC GTCACCAAAG ACGGGTCGCT GGCGGGGCCG AAAGTGCTGG AACACTGTAT CGATTGCTCA GTATTGCTCG ACGGCGACGC CGATTCTCGT TTTCGCACGC TGCGCAGCCA CAAAAACCGC TTTGGCGCAG TCAATGAGCT GGGCGTCTTC GCCATGACCG AACAGGGGTT GCGCGAAGTG AGCAATCCGT CCGCCATCTT TTTAAGCCGC GGCGATGAGG TCACTTCCGG CAGTTCAGTG ATGGTCGTCT GGGAAGGCAC GCGACCGTTG CTGGTGGAGA TTCAGGCGCT GGTCGATCAC TCGATGATGG CGAACCCCAG ACGCGTGGCG GTCGGTCTGG AACAAAACCG TCTGGCTATC CTGCTGGCGG TGCTGCACCG ACACGGCGGT CTGCAAATGT CGGATCAGGA CGTCTTCGTC AACGTGGTCG GCGGCGTGAA AGTCACCGAA ACCAGCGCGG ATCTGGCTTT ACTGCTGGCG ATGGTCTCCA GCTTGCGTGA CAGGCCGTTG CCGCAGGATC TGGTGGTGTT TGGCGAAGTG GGGCTGGCAG GCGAGATTCG TCCGGTGCCG AGCGGGCAGG AGCGTATTTC CGAGGCGGCG AAACACGGCT TTCGTCGGGC GATTGTGCCT GCCGCCAACG TACCGAAAAA GCCGCCGGAA GGAATGCAGG TGTTCGGTGT TAAAAAGCTC GCAGATGCGT TAAGCGTGTT TGACGACTTA TAA
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Protein sequence | MAKAPKRAFV CNECGADYPR WQGQCSACQA WNTITEVRLA ASPTVARNER LSGYAGSAGV SKVQKLSDIS LEELPRFSTG FKEFDRVLGG GVVPGSAILI GGNPGAGKST LLLQTLCKLA EQMKTLYVTG EESLQQVAMR AHRLGLPTAN LNMLSETSIE QICLIAEEEQ PKLMVIDSIQ VMHMADIQSS PGSVAQVRET AAYLTRFAKT RGVAIVMVGH VTKDGSLAGP KVLEHCIDCS VLLDGDADSR FRTLRSHKNR FGAVNELGVF AMTEQGLREV SNPSAIFLSR GDEVTSGSSV MVVWEGTRPL LVEIQALVDH SMMANPRRVA VGLEQNRLAI LLAVLHRHGG LQMSDQDVFV NVVGGVKVTE TSADLALLLA MVSSLRDRPL PQDLVVFGEV GLAGEIRPVP SGQERISEAA KHGFRRAIVP AANVPKKPPE GMQVFGVKKL ADALSVFDDL
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