Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4982 |
Symbol | deoC |
ID | 6872556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4810959 |
End bp | 4811738 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642787852 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_002218442 |
Protein GI | 198242743 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 103 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATT TAAAAGCAAG CAGCCTGCGT GCGCTCAAAC TGATGGATCT GACCACTCTG AACGATGACG ACACCAATGA AAAAGTGATC GCGTTGTGTC ATCAGGCAAA AACTCCGGTC GGGAATACGG CGGCGATTTG TATTTACCCG CGTTTTATCC CGATTGCGCG TAAAACTCTG AAAGAACAAG GTACGCCGGA CATCCGCATT GCAACGGTGA CTAACTTCCC GCATGGCAAT GATGACATCG ATATTGCGCT GGCGGAAACC CGTGCGGCGA TCGCCTACGG CGCTGACGAA GTGGACGTGG TATTCCCGTA CCGCGCGTTG ATCGCCGGTA ACGAGCAGGT GGGTTTTGAC CTGGTAAAAG CCTGTAAAGA CGCTTGTGCC GCAGCGAACG TATTGCTGAA AGTGATCATC GAAACTGGCG AGCTGAAAGA AGAGGCGCTG ATTCGTAAAG CCTCTGAAAT CTCCATTAAA GCCGGTGCGG ATTTCATCAA AACCTCTACC GGTAAAGTGC CGGTAAACGC TACGCCGGAA AGCGCGCGCA TCATGATGGA AGTGATCCGC GACATGGGCG TTTCCAAAAC CGTTGGCTTC AAACCGGCGG GCGGCGTACG TACGGCGGAA GACGCGCAGA AATTCCTCGC GATTGCAGAC GAACTGTTTG GCGCTGACTG GGCAGATTCT CGTCACTACC GCTTTGGCGC ATCCAGCCTG CTGGCAAGCC TGCTGAAAGC GCTGGGTCAC GGCGACGGTA AGAGCGCCAG CAGCTACTAA
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Protein sequence | MTDLKASSLR ALKLMDLTTL NDDDTNEKVI ALCHQAKTPV GNTAAICIYP RFIPIARKTL KEQGTPDIRI ATVTNFPHGN DDIDIALAET RAAIAYGADE VDVVFPYRAL IAGNEQVGFD LVKACKDACA AANVLLKVII ETGELKEEAL IRKASEISIK AGADFIKTST GKVPVNATPE SARIMMEVIR DMGVSKTVGF KPAGGVRTAE DAQKFLAIAD ELFGADWADS RHYRFGASSL LASLLKALGH GDGKSASSY
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