Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4970 |
Symbol | rsmC |
ID | 6875850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4800666 |
End bp | 4801694 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642787840 |
Product | 16S ribosomal RNA m2G1207 methyltransferase |
Protein accession | YP_002218430 |
Protein GI | 198242075 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000752166 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTT TTACCCCGGC AAGTGAAGTC TTGCTGCGCC ACAGTGATGA TTTCGAACAA AGCCGTATTC TTTTTGCCGG AGATTTGCAG GATGACCTGC CCGCGCGCTT TGAATGCGCC GCCAGCCGCG CGCATACGCA ACAGTTTCAC CACTGGCAGG TATTAAGCCG CCAGATGGGC GATAACGTCC GTTTTAGCCT GGTCGCGCAA GCCAGCGATG TCGCCGACTG CGATACGCTG ATCTACTACT GGCCGAAAAA TAAACCCGAA GCGCAGTTCC AGTTGATGAA TATTTTGTCG CTGATGCCGT CGGGCGTCGA TGTTTTCGTC GTGGGAGAAA ACCGCAGCGG CGTGCGTAGC GCCGAACCGA TGCTGGCGGA CTATGCGCCG CTGAACAAAG TAGATAGCGC GCGACGTTGC GGCCTTTACC ATGGCCGTCT GGAAAAGCAG CCGCAGTTTA GTCTTGAATC CTGGTGGGCC GAGTACAACA TCGACGGGCT GACCATCAAA ACGTTGCCGG GCGTATTCAG CCGCGACGGA CTGGATGTTG GTAGCCAACT GCTGCTGTCT ACGCTGACGC CGCACACCAA AGGTAAAGTG CTGGATGTCG GCTGCGGCGC TGGCGTGCTT TCCGCCGCGC TGGCCAGCCA TTCGCCGAAA GTGCGCCTGA CGCTGTGTGA CGTCAGCGCT CCGGCGGTGG AAGCCAGCCG CGCCACGCTT GCCGCTAATG GTCTTGAAGG CGAGGTATTC GCCAGCAACG TCTTTTCGGA AGTCAAAGGA CGTTTTGACA TGATCATCTC CAACCCGCCG TTCCACGACG GAATGCAAAC CAGCCTCGAT GCGGCGCAAA CGCTCATTCG CGGCGCAGTG CGCCATCTGA ACAGCGGCGG GGAGTTACGC ATCGTGGCGA ACGCCTTTCT GCCCTATCCT AAGATTCTGG ATGAGACTTT TGGCTTCCAT GAAGTCATCG CGCAAACCGG GCGCTTTAAG GTTTATCGTA CCGTGATGAC CCGTCAGGCG AAGAAATAG
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Protein sequence | MSAFTPASEV LLRHSDDFEQ SRILFAGDLQ DDLPARFECA ASRAHTQQFH HWQVLSRQMG DNVRFSLVAQ ASDVADCDTL IYYWPKNKPE AQFQLMNILS LMPSGVDVFV VGENRSGVRS AEPMLADYAP LNKVDSARRC GLYHGRLEKQ PQFSLESWWA EYNIDGLTIK TLPGVFSRDG LDVGSQLLLS TLTPHTKGKV LDVGCGAGVL SAALASHSPK VRLTLCDVSA PAVEASRATL AANGLEGEVF ASNVFSEVKG RFDMIISNPP FHDGMQTSLD AAQTLIRGAV RHLNSGGELR IVANAFLPYP KILDETFGFH EVIAQTGRFK VYRTVMTRQA KK
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