Gene SeD_A4958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4958 
Symbol 
ID6875315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4793052 
End bp4793591 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content56% 
IMG OID642787828 
Productprimosomal protein DnaI 
Protein accessionYP_002218421 
Protein GI198244595 
COG category[R] General function prediction only 
COG ID[COG5529] Pyocin large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.142503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCA GAATTTTAAC GTCGGACGTC ATCGGTATTG ACGCCCTTTT ACACGATCAT 
CATGCTGTGC TGGCGAAGTC AACGGGCGGC GCAGTGGCGG TATTCGCTAA TAATGCGCCT 
GCCTTTTATG CCGTGACGCC TGCACGCATG GCTGAACTGC TGGCGCTTGA AGAAAAGTTA 
TCACGTCCGG GAAGCGATGT GGCGTTAGAC GCACAATTTT ACGAAGAACC CGAAGCCGCC 
CCCGTTGCGA TTCCCTGCGG AAAATTCGCC ATGTATCCCG CCTGGCAACC GGATGCGGAT 
TTTCAGCGTC AGGCTGCCCT TTGGGGCGTG GCGCTTCGGG AGCCGGTCAC CGCAGAAGAG 
CTGGCGGCGT TTATCGCCTA CTGGCAGGCG GAAGGTAAGG TTTTTCACCA TATCCAGTGG 
CAGCAAAAGC TGGCGCGCAG CGTGCAAATC AGCCGTTCCA GCAATGGCGG AATGCCGCAG 
CGCGACATCA ATAGCGTCAG CGAACCTGAC AATCATATTC CACCAGGTTT TAGGGGGTAA
 
Protein sequence
MSSRILTSDV IGIDALLHDH HAVLAKSTGG AVAVFANNAP AFYAVTPARM AELLALEEKL 
SRPGSDVALD AQFYEEPEAA PVAIPCGKFA MYPAWQPDAD FQRQAALWGV ALREPVTAEE 
LAAFIAYWQA EGKVFHHIQW QQKLARSVQI SRSSNGGMPQ RDINSVSEPD NHIPPGFRG