Gene SeD_A4950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4950 
Symbol 
ID6874037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4784894 
End bp4785355 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content46% 
IMG OID642787820 
ProductPTS system transporter subunit IIB 
Protein accessionYP_002218413 
Protein GI198243792 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.315233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.320869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTTT TTTTACGGGT GGATCATCGT TTATTACATG GACAGGTCGC CTTTTCCTGG 
ACGCAGTACG TTGGCGCAGA CTGTATTTTA ATTGCCAACG ACAGCGTACC TAATGATGAC
CTGCGTAAAA CCACCATTAA GATGGCGAAG CCGCCCGCGG TGAAGCTGGT TATTAAAAAT
ATTGCCGATT CAATTGAAGC GATAAAAAGC GGCGTTACCG ATAAATATAA ACTTTTTATT
GTTGTTGAAT CCGTGGCGGA TGCGTACCGG CTGGCGCGCG AATTACCCGA CATTAAAAGT
ATTAATTTAG GCGGCACGAA GGTACGTGAA GGGAGCCAGA ATATTGCTAA AGCCATCAAT
CTGTTAGCGG ATGAAATGAC TCAACTTCGG GAGCTGGCGG CTGGCGGAGT AGAGATAGAA
ATTCGGCTGG TGCCTAACGA TCGTAAACAA CTTTTTGCCT GA
 
Protein sequence
MIVFLRVDHR LLHGQVAFSW TQYVGADCIL IANDSVPNDD LRKTTIKMAK PPAVKLVIKN 
IADSIEAIKS GVTDKYKLFI VVESVADAYR LARELPDIKS INLGGTKVRE GSQNIAKAIN
LLADEMTQLR ELAAGGVEIE IRLVPNDRKQ LFA