Gene SeD_A4943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4943 
Symbol 
ID6871312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4775824 
End bp4776780 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content56% 
IMG OID642787813 
Productputative GTP-binding protein YjiA 
Protein accessionYP_002218406 
Protein GI198242016 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.715992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGA TTGCAGTTAC CCTACTTACC GGTTTTCTTG GTGCCGGCAA AACCACCCTA 
CTACGCCATA TCCTCAACGA ACAACATGGT TTTAAAATCG CCGTTATCGA AAACGAATTT 
GGCGAAGTCT CCGTTGACGA TCAACTGATT GGCGATCGCG CCACACAGAT CAAAACCCTG 
ACTAACGGCT GCATCTGTTG TACCCGCTCC AACGAGCTGG AAGATGCGCT ATTAGACCTG 
CTCGACAGCC GCGACCGCGG CGATATTGCT TTCGACCGCC TGGTGATTGA ATGCACCGGC 
ATGGCTGACC CCGGCCCGAT AATTCAGACC TTTTTCTCCC ATGACGTATT ATGCGAACGC 
TACCTGTTAG ACGGCGTGAT TGCGCTGGTC GACGCGGTGC ACGCTAACGA GCAGATGAAC 
CAGTTCACCA TCGCCCAGTC GCAGATAGGC TACGCCGACC GTATCCTGCT GACCAAAACC 
GACGTGGCAG GCGACAGCGA GAAACTGCGC GAGCGGCTGG CGCGTATCAA CGCCCGCGCC 
CCGGTTTACA CCGTGGTACA CGGCGATATT GACCTGAGTC AGTTGTTTAA TACCAGCGGC 
TTTATGCTGG AAGAGAGCGT GCTGGCAAGC CAACCGCGTT TCCACTTTAT TGCCGATAAA 
CAGAACGATG TGTCGTCAAT TGTGGTGGAA CTGGATTACC CGGTGGATAT CAGCGAGGTT 
TCGCGGGTGA TGGAAAACCT GCTGCTGGAA TCAGCGGATA AACTGCTGCG TTACAAAGGG 
ATGCTGTGGA TCGACGGCGA ACCCAACCGC CTGCTGTTCC AGGGCGTGCA GCGCCTCTAC 
AGCGCCGACT GGGACAGACC GTGGGGCGAC GAAACGCCGC ACAGCACGCT GGTATTTATC 
GGGATCCAGT TGCCGGAAGA CGAGATCAGA GCGGCGTTTG CGGGGTTAAG GAAGTAA
 
Protein sequence
MTPIAVTLLT GFLGAGKTTL LRHILNEQHG FKIAVIENEF GEVSVDDQLI GDRATQIKTL 
TNGCICCTRS NELEDALLDL LDSRDRGDIA FDRLVIECTG MADPGPIIQT FFSHDVLCER 
YLLDGVIALV DAVHANEQMN QFTIAQSQIG YADRILLTKT DVAGDSEKLR ERLARINARA 
PVYTVVHGDI DLSQLFNTSG FMLEESVLAS QPRFHFIADK QNDVSSIVVE LDYPVDISEV 
SRVMENLLLE SADKLLRYKG MLWIDGEPNR LLFQGVQRLY SADWDRPWGD ETPHSTLVFI 
GIQLPEDEIR AAFAGLRK