Gene SeD_A4928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4928 
Symbol 
ID6871141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4761598 
End bp4762518 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content49% 
IMG OID642787802 
Producttransporter 
Protein accessionYP_002218395 
Protein GI198245935 
COG category[S] Function unknown 
COG ID[COG3586] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.262598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.517515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA TCCAGCTTTT CCGCCTCGGT GGCGGGAAAG TACAAGAACT GCCGGGCAAA 
GCCGCAGCCA TTGAAAAAGA TCTGCAAATG CTGATCGAAT CCCATATGGA AACGTTCCTT 
GGCGTCCGCT TTCTCGAGAC CGAATACCAC ACGGGTAAAA CCCATCGTGG GCGAATTGAT 
TCCCTCGGCC TCGATGAAAA TAACTGCCCG GTGATTATTG AATATAAGCG CCACAGCAAT 
GAAAACGTCA TTAACCAGGG GCTGTTTTAT CTCGACTGGC TGCTCGATCA TAAAGCGGAA 
TTTCAGTTGC TGGTGATGGA AAAAATAAGT AAAACCGCGG CCAAAGCCAT TGACTGGTCC 
GGCACACGGT TAATCTGTAT TGCCGCCGAT TTTAATAAAT ACGACGAACA TGCCGTTCAG 
CAAATCAACC GCAATATCAA CCTGATCCGC TACAAGCTTT TTGCCGACGA CCTGTTAATG 
CTGGAACTGG TTAACGCCGT GGTCGAAAAT AGCCCTCAGT ACATCATCGC GAACGGTTCC 
GTCAGCAGCG GTAAACGCCA TACCCGCACG CAGCGCGAAC AGCTCTCTTC AGCCTCTCCC 
GCGCTGCTTT CATTATATGA ACAGCTAAAA AGTTATGTGC TCTCACTCAG TGATGAGGTT 
CAGTTTAAAG AGCTTAAGCT CTATGACGCC TTCCGCCTCA TTCGCAACTT TCTGTGCGTA 
GCCGTTTATC CCGTGACCGA CCCACACCTA CGCCTGTGGC TGAAAATCAA TCCACAGCAT 
ATCCAGCTTG AAGAAGGATT TAGCCGGGAC GTCACAAACA TTGGCCACTG GGGAACCGGC 
GACGTCGAAT TGATTGTGCG TAACGAACAC GATCTGGATA AAGCCAAACT GCTGATCGAG 
AAAGCCTGGC AGGAAAATTA G
 
Protein sequence
MSDIQLFRLG GGKVQELPGK AAAIEKDLQM LIESHMETFL GVRFLETEYH TGKTHRGRID 
SLGLDENNCP VIIEYKRHSN ENVINQGLFY LDWLLDHKAE FQLLVMEKIS KTAAKAIDWS 
GTRLICIAAD FNKYDEHAVQ QINRNINLIR YKLFADDLLM LELVNAVVEN SPQYIIANGS 
VSSGKRHTRT QREQLSSASP ALLSLYEQLK SYVLSLSDEV QFKELKLYDA FRLIRNFLCV 
AVYPVTDPHL RLWLKINPQH IQLEEGFSRD VTNIGHWGTG DVELIVRNEH DLDKAKLLIE 
KAWQEN