Gene SeD_A4919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4919 
Symbol 
ID6874062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4755571 
End bp4756842 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content54% 
IMG OID642787795 
Productputative inner membrane protein 
Protein accessionYP_002218388 
Protein GI198244698 
COG category[S] Function unknown 
COG ID[COG2733] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.346159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.443006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TCGCCGAACT CAAACGCGCC AAACGCCTGG CGCTCTCACT GTTGCTGATA 
GCCGCCGCGA CGTTTGTAAC CACGCTTTTC CTACCGCCCA GTTTTTGGGT GCTGGGCGTA 
AAAGCTATTG CCGAAGCGGC GATGGTTGGC GCGCTGGCGG ACTGGTTTGC CGTGGTGGCG 
CTGTTTCGCC GCATTCCCAT TCCGTTTATT TCACGACATA CGGCGATTAT TCCCCGTAAC 
AAAGACCGAA TCGGCGAAAA TCTTGGGCAA TTTGTACAGG AGAAGTTCCT TGATACGCAG 
TCGCTGATCG CGCTAATCCG CCGCCATGAA CCCGCGCTGC TTATCGGAAA CTGGTTCAGC 
CAGCCGGACA ACGCCAGCCG GGTCGGGCAG CATCTGCTGC AAATTATGAG CGGCTTTCTG 
GAACTAACCG ATGACGCCCG TATTCAGCGG CTGCTCAAGC GAGCGGTACA TAAGGCGATT 
GATAAAGTGG ATCTTTCCGG CACCAGCGCC CTGATGCTGG AAAGCATGAC CAAAAACGAT 
CGTCACCAGG TGTTACTCGA TACGCTGATC GCCCAGCTTA TCGCCCTGTT ACAGCGTGAC 
AGCTCCCGAA CATTTATCGC CAGACAGATC ATACGCTGGC TGGAAACCGA ACATCCGTTA 
AAAGCGAAGA TTCTGCCGAC TGAATGGCTG GGAGAACACA GCGCTGAACT GGTCTCCGAC 
GCGGTAAATT CTCTGCTGGA TGATATCAGT CACGACCGCG CGCATCAGAT TCGTCATGCC 
TTCGATCGTG CGACGTATAA GCTGATCGAT AAACTTAAAC ATGATCCGGA AATGGCTGCC 
CGGGCAGAAA ACATTAAAAG TTACCTGAAG GAAGATGAGG CGTTTAACCG TTATCTCGGC 
GAAATCTGGG CGGATCTACG CCAGTGGTTA AAAACAGATA TCAACGCCGA AGACTCAAAG 
GTGAAGCAGC GCATCGCTCA TGCCGGACAA TGGTTTGGCG AGACGCTGAT CGCCGACGAC 
GCATTACGCG CCTCGCTTAA CGGTCATCTG GAACAGGCCG CGCACCGCGT CGCGCCGGAA 
TTCGCCGCCT TCCTGACGCG CCACATCAGC GATACCGTAA AAGGCTGGGA TGCGCGCGAT 
ATGTCGCAGC AGATTGAGCT TAATATCGGT AAAGATTTGC AGTTTATCCG CGTGAACGGC 
ACGCTGGTCG GCGGCGCTAT TGGTCTGGTG TTATATTTAC TGTCGCAAAT ACCGGCACTG 
CTCAGTATCT AA
 
Protein sequence
MNKIAELKRA KRLALSLLLI AAATFVTTLF LPPSFWVLGV KAIAEAAMVG ALADWFAVVA 
LFRRIPIPFI SRHTAIIPRN KDRIGENLGQ FVQEKFLDTQ SLIALIRRHE PALLIGNWFS 
QPDNASRVGQ HLLQIMSGFL ELTDDARIQR LLKRAVHKAI DKVDLSGTSA LMLESMTKND 
RHQVLLDTLI AQLIALLQRD SSRTFIARQI IRWLETEHPL KAKILPTEWL GEHSAELVSD 
AVNSLLDDIS HDRAHQIRHA FDRATYKLID KLKHDPEMAA RAENIKSYLK EDEAFNRYLG 
EIWADLRQWL KTDINAEDSK VKQRIAHAGQ WFGETLIADD ALRASLNGHL EQAAHRVAPE 
FAAFLTRHIS DTVKGWDARD MSQQIELNIG KDLQFIRVNG TLVGGAIGLV LYLLSQIPAL 
LSI