Gene SeD_A4916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4916 
Symbol 
ID6873264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4752165 
End bp4752626 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content56% 
IMG OID642787792 
Producthypothetical protein 
Protein accessionYP_002218385 
Protein GI198245923 
COG category[S] Function unknown 
COG ID[COG0700] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.803574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.306844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTC AGGTACGTAA GAATGTCATG GATATGTTTA TCGATGGCGC ACGCCGCGGT 
TTTACCATCG CCACGACCAA CCTGTTACCC AATGTGGTCA TGGCATTTGT CATTATTCAG 
GCGCTGAAAA TTACCGGTCT GCTCGACTGG GTAGGCCATA TCTGCCAGCC CGTGATGGCG 
TTGTGGGGGC TTCCCGGCGA AGCGGCTACG GTGCTTCTGG CTTCGCTGAT GAGTATGGGC 
GGCGCCGTTG GCGTGGCGGC CAGTCTGGCT ACCGCCGGCG CGCTAAGCGG CCACGATGTT 
ACCGTACTAC TGCCAGCCAT TTACCTGATG GGAAACCCGG TACAGAATGT CGGCCGCTGT 
CTCGGTACTG CCGAAGTCAA CGCCAAATAT TACCCGCATA TTATCGCAGT CTGCGCCATC 
AATGCGCTGC TGTCGATCTG GGTCATGCAG CTTATTGTTT AA
 
Protein sequence
MTTQVRKNVM DMFIDGARRG FTIATTNLLP NVVMAFVIIQ ALKITGLLDW VGHICQPVMA 
LWGLPGEAAT VLLASLMSMG GAVGVAASLA TAGALSGHDV TVLLPAIYLM GNPVQNVGRC 
LGTAEVNAKY YPHIIAVCAI NALLSIWVMQ LIV