Gene SeD_A4914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4914 
Symbol 
ID6873973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4749953 
End bp4750861 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content53% 
IMG OID642787790 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002218383 
Protein GI198244100 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.616715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.114605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTAA CTGGAGCAGG TTTGCACAAT ATTGAGACAA AATGGCTATA TGGTTTTCTG 
ACGCTGGAAA AGTGCCGCAA TTTCTCTCAG GCCGCCATTA TCCGCAACGT ATCGCAACCC 
GCTTTTAGCC GGCGGATTCG CGCCCTGGAA CATGCCGTGG GCGTTGAACT GTTTAACCGC 
CAGGTCTCGC CGCTACAGCT TTCCGAACAG GGTAAAATCT TTCACTCTCA GGTTCGCCAC 
CTGTTACAGC AGCTGGAAAG CAATCTGACC GAACTGCGCG GCGGCAGCGA TTATACGCTG 
CGTAAAATCA AGATTGCCGC CGCCCACTCG CTCTCCCTCG GCCTGTTGCC GACCATCGTT 
AAGCAGATGC CGACGCAGTT TACCTACGCC GTTGAGGCGA TAGATGTCGA CCAGGCGGTG 
GATATGTTAC GTGAGGGGCA AAGCGATTTT ATCTTTTCCT ATCACGATGA AAACCTGCAA 
CAAGCGCCGT TTGATAATAT CCGCCTGTTT GAGTCGAGAC TGTTTCCGGT TTGCGCCAAC 
AATGGCCGGG GCGAGCCGCG CTATACGCTT GAGCAGCCGC ACTTTCCCCT GCTTAATTAC 
AGTCAGAACT CCTATATGGG CCGGCTGATA AATCGTACTC TGACTCGCCA TGCTGAACTG 
AGTTTCAGTA CATTTTTCGT CTCTTCGATG AGTGAATTGT TAAAACAGGT TGCGATGGAC 
GGCTGCGGAA TCGCCTGGTT GCCCGAGTAT GCTATCCGTC AGGAGATTAC CGACGGACGC 
CTGATAGTGC TTGATGCCGA CGAACTGGTT ATTCCGATTC AGGCTTATGC TTATCGCATG 
AATACCCGCA TGAGTCAGGT AGCCGAAACA TTTTGGCGCG ACCTGCGTGG GCTTCAGGCC 
GCGCTGTAA
 
Protein sequence
MDVTGAGLHN IETKWLYGFL TLEKCRNFSQ AAIIRNVSQP AFSRRIRALE HAVGVELFNR 
QVSPLQLSEQ GKIFHSQVRH LLQQLESNLT ELRGGSDYTL RKIKIAAAHS LSLGLLPTIV 
KQMPTQFTYA VEAIDVDQAV DMLREGQSDF IFSYHDENLQ QAPFDNIRLF ESRLFPVCAN 
NGRGEPRYTL EQPHFPLLNY SQNSYMGRLI NRTLTRHAEL SFSTFFVSSM SELLKQVAMD 
GCGIAWLPEY AIRQEITDGR LIVLDADELV IPIQAYAYRM NTRMSQVAET FWRDLRGLQA 
AL