| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4897 |
|---|
| Symbol | |
|---|
| ID | 6871270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 4738735 |
|---|
| End bp | 4739439 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642787773 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002218366 |
|---|
| Protein GI | 198243697 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.00374047 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGGACGTA AATGGGCAAA TATTGTTGCT AAAAAAACGG CTAAAGACGG TGCAACGTCC
AAAGTATATG CGAAATTTGG TGTAGAAATC TATGCTGCGG CTAAACAAGG TGAACCAGAC
CCGGAATCAA ACTCAGCTTT AAAATTTGTT ATTGAACGTG CGAAACAAGC ACAGGTTCCA
AAACATGTTA TTGATAAAGC CAAAGGTGGC GGAGATGAAA CGTTCGTGCA AGGGCGTTAT
GAAGGCTTTG GACCAAATGG TTCAATGGTT ATCGCTGAAA CGTTGACGTC TAATGTTAAC
CGTACGATTG CTAATATCCG CACAATTTTC AATAAAAAAG GCGGGAATAT CGGAGCGGCA
GGTGCTGTCA GCTATATGTT TGACAATACT GGAGTGATTG TATTTAAAGG AACAGACCCT
GACCATATTT TTGAAATTTT GCTTGATGCT GAAGTTGATG TTCGTGATGT AACCGAAGAA
GAAGGAAACA TCGTTATTTA TACTGAAGCT ACAGACCTGC ATAAAGGAAT CGCAGCGCTA
AAAGCAGCTG GAATTTCTGA ATTTTCAACA ACAGAATTAG AAATGATTGC TCAATCAGAA
GTTGAACTTT CACCAGAAGA TTTAGAAATC TTTGAAGGAC TTGTTGATGC CCTTGAAGAT
GACGATGATG TGCAAAAAGT ATATCATAAC GTTGCAAACC TCTAA
|
|---|
| Protein sequence | MGRKWANIVA KKTAKDGATS KVYAKFGVEI YAAAKQGEPD PESNSALKFV IERAKQAQVP
KHVIDKAKGG GDETFVQGRY EGFGPNGSMV IAETLTSNVN RTIANIRTIF NKKGGNIGAA
GAVSYMFDNT GVIVFKGTDP DHIFEILLDA EVDVRDVTEE EGNIVIYTEA TDLHKGIAAL
KAAGISEFST TELEMIAQSE VELSPEDLEI FEGLVDALED DDDVQKVYHN VANL
|
|---|
| |