Gene SeD_A4876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4876 
Symbol 
ID6873881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4725212 
End bp4725520 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content43% 
IMG OID642787759 
Productcytotoxic protein CcdB 
Protein accessionYP_002218352 
Protein GI198244481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.00610232 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATACA TGGTTTATCG CAATAAAGGA AACAGCAAGG CTTATCCTTA TTTACTTGAT 
GTGCAAAGCG ATATTATTGA TGAACTGCAT ACTCGCATGG TTATCCCATT GTTTCCTGTG
AGCAGATTGG TAAATAACCC AGTTAAGCGC CTCACGCCCA CTCTGAATGT GGAAGGTAAT
GACTATCTGG TGATGACTCA CGAAATGGCG AGTATCAGGC TTTCGCAGAT TGGTGATGAG
GTGATGGACG TTCGTTCCCA CAGGCAAACC ATCAAAAATG CTCTCGATTT TATCTTTGAC
GGGTTCTGA
 
Protein sequence
MQYMVYRNKG NSKAYPYLLD VQSDIIDELH TRMVIPLFPV SRLVNNPVKR LTPTLNVEGN 
DYLVMTHEMA SIRLSQIGDE VMDVRSHRQT IKNALDFIFD GF