| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4868 |
|---|
| Symbol | |
|---|
| ID | 6873227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 4719620 |
|---|
| End bp | 4720384 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642787752 |
|---|
| Product | gluconate 5-dehydrogenase |
|---|
| Protein accession | YP_002218346 |
|---|
| Protein GI | 198243240 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 0.113188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATC TTTTTTCACT GGCAGGTAAA AATATCCTTA TCACCGGAGC CGCTCAGGGA
ATTGGTTATT TGCTGGCGAC CGGTCTTGGT CGCTATGGCG CGCGCATTAT TGTTAACGAT
ATTACCCCGG AGCGCTCCGA CACAGCCGTG ACGAAACTTC AGCAGGAAGG GATAAAGGCT
ATTGCCGCTC CCTTTAATGT CACCCATAAA CAGGATATTG AAGCTGCGGT TGAACATATC
GAAAAAGATA TCGGCGTCAT TGACGTCCTG ATAAATAACG CCGGTATCCA GCGCCGTCAT
CCGTTTACTG AGTTTCCCGA GCAGGAGTGG AATGACGTCA TCGCCGTAAA TCAGACCGCG
GTTTTTCTCG TCTCTCAGGC CGTTACGCGC CGTATGGTGG CGCGTCAGGC AGGAAAAGTG
ATCAACATCT GTTCGATGCA AAGCGAGCTG GGCCGCGACA CGATTACGCC ATACGCCGCG
TCGAAGGGTG CCGTGAAGAT GCTGACTCGC GGCATGTGCG TGGAGCTGGC GCGTCATAAT
ATCCAGGTCA ACGGTATTGC GCCGGGATAC TTCAAAACGG AGATGACCAA AGCGTTGGTT
GAAGATGAAG CCTTCACCTC CTGGCTATGC AAACGTACGC CTGCCGCACG CTGGGGCGAT
CCTCAGGAGC TTATTGGCGC AGCGGTGTTT CTCTCGTCAA AAGCCTCCGA CTTTGTTAAC
GGACATCTGC TGTTTGTCGA TGGCGGTATG CTGGTTGCCG TCTGA
|
|---|
| Protein sequence | MNNLFSLAGK NILITGAAQG IGYLLATGLG RYGARIIVND ITPERSDTAV TKLQQEGIKA
IAAPFNVTHK QDIEAAVEHI EKDIGVIDVL INNAGIQRRH PFTEFPEQEW NDVIAVNQTA
VFLVSQAVTR RMVARQAGKV INICSMQSEL GRDTITPYAA SKGAVKMLTR GMCVELARHN
IQVNGIAPGY FKTEMTKALV EDEAFTSWLC KRTPAARWGD PQELIGAAVF LSSKASDFVN
GHLLFVDGGM LVAV
|
|---|
| |