Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4867 |
Symbol | |
ID | 6871396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4718239 |
End bp | 4719630 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642787751 |
Product | gluconate:H+ symporter family protein |
Protein accession | YP_002218345 |
Protein GI | 198243878 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | [TIGR00791] gluconate transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.147551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCGTCTG ACCAGGGAAA TACGACGCAG CGCGTAAGCG CTGCTATTTT GGCGCTAATA AGAGAGACGA ATATGCCATT AATAATTATT GCGGCAGGCG TTGCGCTGCT GTTGGTCTTA ATGATTGGCT TTAAAGTTAA CGGCTTTATC GCCCTTGTTC TAGTTGCCGC CGTGGTGGGA TTTGCCGAAG GAATGGGCGC GCAAGACGTC CTGCACTCCA TACAAAACGG AATTGGCGGT ACTCTGGGCG GACTCGCCAT GATCCTCGGT TTTGGCGCGA TGCTGGGAAG ATTAATTTCC GACACCGGCG CAGCGCAGCG CATTGCGACG ACGCTCATTA ATACGTTCGG CAAAAAACGC GTGCAATGGG CGCTGGTGAT CACCGGGCTT ATCGTCGGCC TGGCAATGTT TTTTGAAGTC GGATTCGTAC TGCTGTTGCC GCTCGTTTTT ACGATTGTGG CCTCATCGGG ACTGCCATTG CTGTATGTCG GGGTTCCAAT GGTCGCCGCC TTATCCGTTA CGCACTGCTT CCTGCCGCCG CATCCCGGCC CTACCGCTAT TGCGACAATT TTTGAGGCAA ATCTCGGTAC GACCCTGCTG TATGGGTTAA TCATTACCAT ACCGACCGTG ATTGTTGCCG GCCCTCTGTT TTCAAAATTG CTGGCGCGCT TTGAGAAAGC GCCGCCTGAA GGATTATTTA ATCCTCACCT ATTCAGTGAA GAGGAGATGC CGTCATTCTG GAACAGTATT TTTGCCGCCG TGATCCCGGT CATTCTGATG GCCATCGCAG CGGTATGTGA AATCACGCTG CCAAAAACGA ATGCCGTGCG GGTTTTCTTC GAATTTATTG GTAATCCAGC AGTGGCGTTG TTTATTGCCA TTATCATCGC CATTTTTACG CTGGGCCGAC GCAATGGACG TACGGTTGAG CAGGTGATGG ATATCGTCGG CGAGTCCATT GGCGCTATTG CGATGATTGT TTTTATCATC GCGGGCGGCG GCGCGTTTAA GCAAGTGCTG GTGGATAGCG GCGTGGGCCA ATATATCTCG CAATTAATGA CCGGCACCTC GCTATCTCCG TTATTAATGT GCTGGACGGT AGCCGCCGTG CTGCGTATTG CGTTAGGTTC CGCGACCGTG GCCGCGATAA CCACAGCGGG CGTCGTATTG CCGATTATTA ACGTAACCCA CGCCGATCCG GCGTTAATGG TACTGGCGAC AGGCGCGGGA AGCGTTATTG CATCACATGT TAACGATCCC GGTTTTTGGC TGTTTAAAGG GTATTTTAAT CTTAGCGTCG GGGAAACCCT ACGCACCTGG ACCGTTATGG AAACATTGAT TTCTGTCATG GGGTTGCTGG GCGTACTGGC GCTGAATGCG GTTCTGCATT AA
|
Protein sequence | MPSDQGNTTQ RVSAAILALI RETNMPLIII AAGVALLLVL MIGFKVNGFI ALVLVAAVVG FAEGMGAQDV LHSIQNGIGG TLGGLAMILG FGAMLGRLIS DTGAAQRIAT TLINTFGKKR VQWALVITGL IVGLAMFFEV GFVLLLPLVF TIVASSGLPL LYVGVPMVAA LSVTHCFLPP HPGPTAIATI FEANLGTTLL YGLIITIPTV IVAGPLFSKL LARFEKAPPE GLFNPHLFSE EEMPSFWNSI FAAVIPVILM AIAAVCEITL PKTNAVRVFF EFIGNPAVAL FIAIIIAIFT LGRRNGRTVE QVMDIVGESI GAIAMIVFII AGGGAFKQVL VDSGVGQYIS QLMTGTSLSP LLMCWTVAAV LRIALGSATV AAITTAGVVL PIINVTHADP ALMVLATGAG SVIASHVNDP GFWLFKGYFN LSVGETLRTW TVMETLISVM GLLGVLALNA VLH
|
| |