Gene SeD_A4864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4864 
Symbol 
ID6874765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4714800 
End bp4715900 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content56% 
IMG OID642787748 
Productputative permease 
Protein accessionYP_002218342 
Protein GI198242439 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000973807 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.308777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAATCA TAAGATATCT GGTGCGGGAG ACGCTCAAAA GCCAGCTGGC GATACTCTTC 
ATCTTACTTT TGATCTTCTT TTGTCAGAAG TTAGTGAGGA TTCTCGGCGC GGCGGTTGAC 
GGCGATATTC CCGCAAATCT GGTGCTCTCG CTTCTGGGGC TGGGCGTACC GGAAATGGCG 
CAGCTCATCC TGCCTTTAAG CCTGTTCCTG GGGCTGCTGA TGACGCTGGG CAAACTGTAT 
ACCGAAAGTG AAATTACGGT CATGCACGCC TGTGGGTTGA GCAAAGCCGT GCTGGTAAAG 
GCCGCCATGG TACTGGCGTT ATTTACCGGT ATCCTTGCGG CGGTTAATGT GATGTGGGCC 
GGCCCCTGGT CGTCAAAACA CCAGGATGAA GTGCTGGCGG AGGCGAAAGC GAACCCCGGT 
ATGGCGGCGT TGGCGCAGGG ACAATTCCAG CAGGCGACCA ACGGCAGCTC GGTGCTGTTC 
ATCGAAAGCG TTGACGGCAG CGACTTCCAC GATGTTTTCC TGGCGCAAAT TCGCCCTAAG 
GGCAATGCTC GTCCTTCTGT GGTCGTGGCC GATTCCGGAC ACCTTACTCA GTTGCGCGAT 
GGTTCCCAGG TTGTCACCTT AAACAAAGGG ACGCGTTTTG AAGGAACGGC GTTGCTACGC 
GATTTTCGCA TCACCGACTT CCAGAACTAT CAGGCGATTA TTGGCCATCA GGCCGTGGCG 
CTGGACCCGA ACGATACTGA CCAGATGGAC ATGCGCACGC TGTGGAATAC CGACAACGAT 
CGCGCTCGCG CCGAGCTGCA CTGGCGTATC ACGTTAGTCT TTACCGTGTT TATGATGGCG 
CTGATGGTCG TGCCGCTCAG CGTGGTGAAT CCACGTCAGG GGCGCGTCTT GTCTATGTTG 
CCCGCCATGC TGCTTTATCT GCTGTTCTTC CTGATCCAGA CCTCCATTAA ATCGAATGGC 
GGTAAAGGCA AACTGGACCC GGTTATCTGG ATGTGGGCGG TCAACCTGAT CTATCTGGCG 
TTGGCGATTG GTTTAAACCT GTGGGATACG GTGCCGGTCC GCCGCCTGCG TGCCCGTTTT 
CTGCGTAAAG GAGCGGTATA A
 
Protein sequence
MIIIRYLVRE TLKSQLAILF ILLLIFFCQK LVRILGAAVD GDIPANLVLS LLGLGVPEMA 
QLILPLSLFL GLLMTLGKLY TESEITVMHA CGLSKAVLVK AAMVLALFTG ILAAVNVMWA 
GPWSSKHQDE VLAEAKANPG MAALAQGQFQ QATNGSSVLF IESVDGSDFH DVFLAQIRPK 
GNARPSVVVA DSGHLTQLRD GSQVVTLNKG TRFEGTALLR DFRITDFQNY QAIIGHQAVA 
LDPNDTDQMD MRTLWNTDND RARAELHWRI TLVFTVFMMA LMVVPLSVVN PRQGRVLSML 
PAMLLYLLFF LIQTSIKSNG GKGKLDPVIW MWAVNLIYLA LAIGLNLWDT VPVRRLRARF 
LRKGAV